RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GOLGA8MH3BSY2 632 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 SMAD6O43541 496 aaKnown RBP23.33■■□□□ 1.33
CPSF4-204ENST00000436336 SUN1O94901 812 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 MT-CYBP00156 380 aaPredicted RBP23.33■■□□□ 1.33
CPSF4-204ENST00000436336 SRPRAP08240 638 aaKnown RBP23.33■■□□□ 1.33
CPSF4-204ENST00000436336 STK19P49842 368 aaPredicted RBP23.33■■□□□ 1.33
CPSF4-204ENST00000436336 VASPP50552 380 aaPredicted RBP23.33■■□□□ 1.33
CPSF4-204ENST00000436336 CEP128Q6ZU80 1094 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 PRPF39Q86UA1 669 aaKnown RBP23.33■■□□□ 1.33
CPSF4-204ENST00000436336 NUDCD1Q96RS6 583 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 CEP44Q9C0F1 390 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 LRRC40Q9H9A6 602 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 ELOVL2Q9NXB9 296 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 UBP1Q9NZI7 540 aa23.33■■□□□ 1.33
CPSF4-204ENST00000436336 TIMM44O43615 452 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 MMP2P08253 660 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 DLDP09622 509 aaKnown RBP23.33■■□□□ 1.32
CPSF4-204ENST00000436336 CD86P42081 329 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 RGRP47804 291 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 MESP2Q0VG99 397 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 SLC14A2Q15849 920 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 RALGPS1Q5JS13 557 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 CAVIN3Q969G5 261 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 ISG20Q96AZ6 181 aaKnown RBP23.33■■□□□ 1.32
CPSF4-204ENST00000436336 TADA1Q96BN2 335 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 EXOC2Q96KP1 924 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 PHACTR1Q9C0D0 580 aa23.33■■□□□ 1.32
CPSF4-204ENST00000436336 LOC730098B7Z3J9 87 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 PRRT4C9JH25 899 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 INSIG1O15503 277 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 PPFIA2O75334 1257 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 NNMTP40261 264 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 ARL4CP56559 192 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 SKOR1P84550 965 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 HIF1AQ16665 826 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 NUDT18Q6ZVK8 323 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 MRGPRX3Q96LB0 322 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 SERPINB12Q96P63 405 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 XAB2Q9HCS7 855 aaKnown RBP23.32■■□□□ 1.32
CPSF4-204ENST00000436336 SCUBE2Q9NQ36 999 aa23.32■■□□□ 1.32
CPSF4-204ENST00000436336 TTC24A2A3L6 582 aaPredicted RBP23.31■■□□□ 1.32
CPSF4-204ENST00000436336 ASGR2P07307 311 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 SERPINF2P08697 491 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 GRIA2P42262 883 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 SCNN1BP51168 640 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 NAIF1Q69YI7 327 aaPredicted RBP23.31■■□□□ 1.32
CPSF4-204ENST00000436336 NAPEPLDQ6IQ20 393 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 C22orf39Q6P5X5 142 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 KDELC1Q6UW63 502 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 LINC00523Q86TU6 105 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 SUGP1Q8IWZ8 645 aaKnown RBP23.31■■□□□ 1.32
CPSF4-204ENST00000436336 PDIK1LQ8N165 341 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 CYB5D2Q8WUJ1 264 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 PWWP2AQ96N64 755 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 PRDM6Q9NQX0 595 aa23.31■■□□□ 1.32
CPSF4-204ENST00000436336 TBC1D3BA6NDS4 549 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 ATP9BO43861 1147 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 ZNF821O75541 412 aaPredicted RBP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 KAT7O95251 611 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 APODP05090 189 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 MLNP12872 115 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SOX9P48436 509 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 CSNK1DP48730 415 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 CBLBQ13191 982 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SPARCL1Q14515 664 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SLMAPQ14BN4 828 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 PTPRNQ16849 979 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 BEND6Q5SZJ8 279 aaPredicted RBP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 LRRC8BQ6P9F7 803 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 CENPUQ71F23 418 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 ZNF534Q76KX8 674 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 CCDC25Q86WR0 208 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 PCDH20Q8N6Y1 951 aaKnown RBP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 IPMKQ8NFU5 416 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SORCS1Q8WY21 1168 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 MRGPRX2Q96LB1 330 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 NOD2Q9HC29 1040 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 ARFGAP3Q9NP61 516 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SLCO3A1Q9UIG8 710 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 EIF3HO15372 352 aaKnown RBP eCLIP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 PMPCBO75439 489 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 GJB3O75712 270 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 IGSF6O95976 241 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SNRPD1P62314 119 aaKnown RBP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 DLG2Q15700 870 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 ACCSLQ4AC99 568 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 DGKKQ5KSL6 1271 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 CAND1Q86VP6 1230 aaKnown RBP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 KDM1BQ8NB78 822 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 UCMAQ8WVF2 138 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 MYO19Q96H55 970 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 FSD1LQ9BXM9 530 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 TM6SF2Q9BZW4 377 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 C8orf33Q9H7E9 229 aaPredicted RBP23.3■■□□□ 1.32
CPSF4-204ENST00000436336 PLA2G4CQ9UP65 541 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 SLC8A2Q9UPR5 921 aa23.3■■□□□ 1.32
CPSF4-204ENST00000436336 E7ESA3 106 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 SPECC1L-ADORA2AF8WAN1 911 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 AP3B1O00203 1094 aa23.29■■□□□ 1.32
CPSF4-204ENST00000436336 GSRP00390 522 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms