RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 HOXA7P31268 230 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 HOXD13P35453 343 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 PSMB10P40306 273 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 RPS13P62277 151 aaKnown RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 MC1RQ01726 317 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 DPTQ07507 201 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 TMEM115Q12893 351 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 AIMP2Q13155 320 aaKnown RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 FHL2Q14192 279 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 RPE65Q16518 533 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 EARS2Q5JPH6 523 aaKnown RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZNF280DQ6N043 979 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 TMCO3Q6UWJ1 677 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 TEX11Q8IYF3 940 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZDHHC23Q8IYP9 409 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 TMEM217Q8N7C4 229 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 PLD5Q8N7P1 536 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ARL14EPQ8N8R7 260 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 SEMA6DQ8NFY4 1073 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 TMEM170AQ8WVE7 144 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 MAP4K1Q92918 833 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ERP27Q96DN0 273 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ITPAQ9BY32 194 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 FTOQ9C0B1 505 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 USP44Q9H0E7 712 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 RRP7BPQ9NSQ0 103 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZDHHC7Q9NXF8 308 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 NKIRAS2Q9NYR9 191 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 NCKIPSDQ9NZQ3 722 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 SERGEFQ9UGK8 458 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZNHIT2Q9UHR6 403 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZNF215Q9UL58 517 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 FAM96BQ9Y3D0 163 aa4.79□□□□□ -1.64
HMGB1P45-201ENST00000435986 WDR17Q8IZU2 1322 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 FAM237BA0A1B0GVD1 139 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 SLC22A23A1A5C7 686 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 SYNDIG1LA6NDD5 238 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 LIPT2A6NK58 231 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 FAM157AC9JC47 383 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZNF500O60304 480 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 IPO7O95373 1038 aaKnown RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 KRT10P13645 584 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 RFC1P35251 1148 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 RAD52P43351 418 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 PTPN9P43378 593 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 TGFB2P61812 414 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 YPEL5P62699 121 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 CREB5Q02930 508 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZBTB16Q05516 673 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 TMEM119Q4V9L6 283 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZNF667Q5HYK9 610 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 KIAA1755Q5JYT7 1200 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 ZKSCAN2Q63HK3 967 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 IGFL4Q6B9Z1 124 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 FAM43BQ6ZT52 329 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 TBC1D26Q86UD7 250 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 CREB3L4Q8TEY5 395 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 HASPINQ8TF76 798 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 SGCDQ92629 289 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 MOAP1Q96BY2 351 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 FAM120BQ96EK7 910 aaKnown RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 BBS4Q96RK4 519 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 MOV10Q9HCE1 1003 aaKnown RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 FBRSL1Q9HCM7 1045 aaKnown RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 ADD3Q9UEY8 706 aaKnown RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 TBC1D29Q9UFV1 150 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 CORO1CQ9ULV4 474 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 LAMP3Q9UQV4 416 aa4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 AAR2Q9Y312 384 aaKnown RBP4.78□□□□□ -1.64
HMGB1P45-201ENST00000435986 A0A1W2PQM1 296 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 LINC01548A6NM66 108 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 FOXO6A8MYZ6 492 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 AKAP8O43823 692 aaKnown RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 UGDHO60701 494 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 NDUFS3O75489 264 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 MT-CYBP00156 380 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 IGLV2-14P01704 120 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 CSH1P0DML2 217 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 CSH2P0DML3 217 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 TMEM11P17152 192 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SAT1P21673 171 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 CD72P21854 359 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 TTKP33981 857 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 DPP6P42658 865 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 LMAN1P49257 510 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SNX16P57768 344 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 EPS8Q12929 822 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 ITGADQ13349 1161 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 ACVR2BQ13705 512 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 ME3Q16798 604 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 UBAP2Q5T6F2 1119 aaKnown RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 HMBOX1Q6NT76 420 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 KLHL35Q6PF15 583 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 MOB3CQ70IA8 216 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 OR8H2Q8N162 312 aa4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 SRBD1Q8N5C6 995 aaKnown RBP4.77□□□□□ -1.65
HMGB1P45-201ENST00000435986 C8orf58Q8NAV2 365 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms