RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PIK3R6Q5UE93 754 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PKN3Q6P5Z2 889 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 ARID3BQ8IVW6 561 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 KIF2BQ8N4N8 673 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 APOL2Q9BQE5 337 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PRKD2Q9BZL6 878 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 NKX2-4Q9H2Z4 354 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 VPS45Q9NRW7 570 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 GMIPQ9P107 970 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 COPG2Q9UBF2 871 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 MTRRQ9UBK8 725 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 MTMR11A4FU01 709 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 GRM6O15303 877 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 TBC1D4O60343 1298 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 GSRP00390 522 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 APOA4P06727 396 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 CALB2P22676 271 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 PAPOLAP51003 745 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 TBCCQ15814 346 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MS4A13Q5J8X5 152 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MBLAC2Q68D91 279 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 CNTN4Q8IWV2 1026 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 IPMKQ8NFU5 416 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 PIWIL2Q8TC59 973 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 PPP4R1Q8TF05 950 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 VPS39Q96JC1 886 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 CDK5RAP1Q96SZ6 601 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MCMBPQ9BTE3 642 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 SLC25A51Q9H1U9 297 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 RHOJQ9H4E5 214 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MPP6Q9NZW5 540 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 SORCS3Q9UPU3 1222 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 ANKRD6Q9Y2G4 727 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MYO9BQ13459 2157 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 TEX28O15482 410 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 H2AFYO75367 372 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 VNN2O95498 520 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MT-CYBP00156 380 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 HLA-DQB2P05538 268 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 CNPP09543 421 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 NMBRP28336 390 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 ADRA1AP35348 466 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 IRS1P35568 1242 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 USP46P62068 366 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 PCLAFQ15004 111 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 ZNF683Q8IZ20 524 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 SPATA22Q8NHS9 363 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 GIPC2Q8TF65 315 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 GPR22Q99680 433 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 HERC2P3Q9BVR0 1158 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 RETREG1Q9H6L5 497 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 IL1RAPL1Q9NZN1 696 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 STK38LQ9Y2H1 464 aa12.1□□□□□ -0.47
CTCFL-209ENST00000433949 HBS1LQ9Y450 684 aaKnown RBP12.1□□□□□ -0.47
CTCFL-209ENST00000433949 TRANK1O15050 2925 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 A0A096LPK6 155 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 CCDC195A0A1B0GUA6 201 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 RFXAPO00287 272 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 WFS1O76024 890 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 CBX6O95503 412 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 FGF3P11487 239 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TPH1P17752 444 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 SLC1A6P48664 564 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TNK2Q07912 1038 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 PPP2R2DQ66LE6 453 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 SLC8B1Q6J4K2 584 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 RANBP10Q6VN20 620 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 C14orf80Q86SX3 495 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 RBM23Q86U06 439 aaKnown RBP12.09□□□□□ -0.47
CTCFL-209ENST00000433949 NSL1Q96IY1 281 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TSNARE1Q96NA8 513 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 FICDQ9BVA6 458 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 ZBP1Q9H171 429 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TLE6Q9H808 572 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 CYP4F11Q9HBI6 524 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 IARS2Q9NSE4 1012 aaKnown RBP12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TMEM216Q9P0N5 145 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms