RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TECP42680 631 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 PEX5P50542 639 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 DHX34Q14147 1143 aaKnown RBP3.89□□□□□ -1.79
PTPN4-205ENST00000433888 STARD3Q14849 445 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 IL31Q6EBC2 164 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 NCAPH2Q6IBW4 605 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 TUBA1AQ71U36 451 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 LMNTD1Q8N9Z9 388 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 MCPH1Q8NEM0 835 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 TUBA1CQ9BQE3 449 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 CLPBQ9H078 707 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 EVA1AQ9H8M9 152 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 UBTD1Q9HAC8 227 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 SYN3O14994 580 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 FFAR2O15552 330 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 KIF1CO43896 1103 aaKnown RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CCNT1O60563 726 aaKnown RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 ITGA2BP08514 1039 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CFC1P0CG37 223 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 IGHV4-30-4P0DP06 118 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 SERPINA4P29622 427 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 SSTR2P30874 369 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 GPR12P47775 334 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 MTNR1AP48039 350 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 MVDP53602 400 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 AP2B1P63010 937 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 GALNT1Q10472 559 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 ST3GAL1Q11201 340 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 PFKFB4Q16877 469 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CCDC181Q5TID7 509 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 PMS2CLQ68D20 193 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 KSR2Q6VAB6 950 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 MARK2Q7KZI7 788 aaKnown RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 AADATQ8N5Z0 425 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CPT1BQ92523 772 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 ATOH1Q92858 354 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 ZNF385AQ96PM9 386 aaKnown RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 HERC2P3Q9BVR0 1158 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 MMP28Q9H239 520 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CXorf56Q9H5V9 222 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 WDR6Q9NNW5 1121 aaKnown RBP3.88□□□□□ -1.79
PTPN4-205ENST00000433888 THAP1Q9NVV9 213 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 TMEM51Q9NW97 253 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 CHPF2Q9P2E5 772 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 NLKQ9UBE8 527 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 FBXO40Q9UH90 709 aa3.88□□□□□ -1.79
PTPN4-205ENST00000433888 A0A096LPK6 155 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 CLGNO14967 610 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 VNN2O95498 520 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 CH25HO95992 272 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 TFRCP02786 760 aaKnown RBP3.87□□□□□ -1.79
PTPN4-205ENST00000433888 DGKAP23743 735 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 YWHAQP27348 245 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 GNALP38405 381 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 SKIV2L2P42285 1042 aaKnown RBP3.87□□□□□ -1.79
PTPN4-205ENST00000433888 NEK3P51956 506 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 BRWD1-AS2P59051 145 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 BTKQ06187 659 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 FAM27E3Q08E93 113 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 LPIN1Q14693 890 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 RBBP5Q15291 538 aaKnown RBP3.87□□□□□ -1.79
PTPN4-205ENST00000433888 RPS6KA2Q15349 733 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 RPE65Q16518 533 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 KRT71Q3SY84 523 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 LIN54Q6MZP7 749 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 UNQ6126/PRO20091Q6UXV3 157 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 RINLQ6ZS11 566 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 SRLQ86TD4 932 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 OTUD7AQ8TE49 926 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-205ENST00000433888 CD101Q93033 1021 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 DDX23Q9BUQ8 820 aaKnown RBP3.87□□□□□ -1.79
PTPN4-205ENST00000433888 EBF2Q9HAK2 575 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 NDUFAF4Q9P032 175 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 LRFN1Q9P244 771 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 BAG5Q9UL15 447 aa3.87□□□□□ -1.79
PTPN4-205ENST00000433888 CPED1A4D0V7 1026 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 OR6C68A6NDL8 312 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 PMS2P2O95744 297 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 SERPINF1P36955 418 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 RPL3P39023 403 aaKnown RBP3.86□□□□□ -1.79
PTPN4-205ENST00000433888 CXCR3P49682 368 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 CCDC6Q16204 474 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 CCDC129Q6ZRS4 1044 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 RASGRP2Q7LDG7 609 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 NEK9Q8TD19 979 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 TRIB2Q92519 343 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 UHRF2Q96PU4 802 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 C1QTNF5Q9BXJ0 243 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 TMLHEQ9NVH6 421 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 KCND3Q9UK17 655 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 CLDN16Q9Y5I7 305 aa3.86□□□□□ -1.79
PTPN4-205ENST00000433888 TP53BP1Q12888 1972 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-205ENST00000433888 IGHV4OR15-8A0A075B7B6 117 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 SYT5O00445 386 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 PPM1GO15355 546 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-205ENST00000433888 SERPINB2P05120 415 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 NBPF7P0C2Y1 421 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-205ENST00000433888 MYF6P23409 242 aa3.85□□□□□ -1.79
PTPN4-205ENST00000433888 PDIA3P30101 505 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms