RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CBFA2T3O75081 653 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 TMEM127O75204 238 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 ATP6V1G1O75348 118 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 DGAT1O75907 488 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 ASS1P00966 412 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 LTFP02788 710 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 DNTTP04053 509 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 SFTPCP11686 197 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 TPSB2P20231 275 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 POU3F2P20265 443 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 GLDCP23378 1020 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 POLR2BP30876 1174 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 GRM5P41594 1212 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 MAGEA10P43363 369 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 IDH3AP50213 366 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CACNB3P54284 484 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 HDAC4P56524 1084 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 YWHAGP61981 247 aaKnown RBP eCLIP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 BASP1P80723 227 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 IKQ13123 557 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 HERC3Q15034 1050 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 TPSAB1Q15661 275 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CNGA3Q16281 694 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 FAM109BQ6ICB4 259 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 SLFN12LQ6IEE8 588 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 DUS1LQ6P1R4 473 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 PKN3Q6P5Z2 889 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 C6orf15Q6UXA7 325 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 SETD3Q86TU7 594 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CHERPQ8IWX8 916 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 WDTC1Q8N5D0 677 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 BRSK1Q8TDC3 778 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 BSNDQ8WZ55 320 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CENPIQ92674 756 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 KISS1RQ969F8 398 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 ITPKCQ96DU7 683 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 HAUS8Q9BT25 410 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 TUBA8Q9NY65 449 aaPredicted RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 SLC9A2Q9UBY0 812 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 RSL24D1Q9UHA3 163 aaKnown RBP8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CDH7Q9ULB5 785 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 EMCNQ9ULC0 261 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 CNTNAP2Q9UHC6 1331 aa8.18□□□□□ -1.1
VTI1A-202ENST00000432306 ITM2AO43736 263 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SGTAO43765 313 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PIAS1O75925 651 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GH2P01242 217 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PRKCGP05129 697 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ICAM1P05362 532 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SRGAP2CP0DJJ0 459 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 CSH1P0DML2 217 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 CSH2P0DML3 217 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SRGAP2BP0DMP2 458 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MLNP12872 115 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 COX4I1P13073 169 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 P4HA1P13674 534 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FSHRP23945 695 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PCSK6P29122 969 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MAGEA12P43365 314 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SLC1A6P48664 564 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 JAG1P78504 1218 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MRPS9P82933 396 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PPIDQ08752 370 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DPYSQ14117 519 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TFDP2Q14188 446 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 LPIN1Q14693 890 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PCLAFQ15004 111 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 UGCGQ16739 394 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FASTKD1Q53R41 847 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 XKR9Q5GH70 373 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PIGGQ5H8A4 983 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 NOL9Q5SY16 702 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PDPK2PQ6A1A2 396 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PDE12Q6L8Q7 609 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 RWDD4Q6NW29 188 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 KLHL35Q6PF15 583 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DARS2Q6PI48 645 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 C16orf89Q6UX73 402 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PACS1Q6VY07 963 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FRMD7Q6ZUT3 714 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DENND5BQ6ZUT9 1274 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 HPS6Q86YV9 775 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 KIAA0319LQ8IZA0 1049 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DEFB107AQ8IZN7 70 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 CPSF7Q8N684 471 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PPM1NQ8N819 430 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FAM71DQ8N9W8 422 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GOLM1Q8NBJ4 401 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SLC7A14Q8TBB6 771 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SHKBP1Q8TBC3 707 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 HM13Q8TCT9 377 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TOP1MTQ969P6 601 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FUBP3Q96I24 572 aaKnown RBP eCLIP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 VPS50Q96JG6 964 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms