RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 FICDQ9BVA6 458 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
DDX56-204ENST00000431640 PRO3102Q9H379 93 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 RHOJQ9H4E5 214 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 MARCH2Q9P0N8 246 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 SLC17A6Q9P2U8 582 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 COPG2Q9UBF2 871 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 TLK1Q9UKI8 766 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 A0A096LPK6 155 aa13□□□□□ -0.33
DDX56-204ENST00000431640 MTMR11A4FU01 709 aa13□□□□□ -0.33
DDX56-204ENST00000431640 MT-CYBP00156 380 aaPredicted RBP13□□□□□ -0.33
DDX56-204ENST00000431640 GSRP00390 522 aa13□□□□□ -0.33
DDX56-204ENST00000431640 HLA-DQB2P05538 268 aa13□□□□□ -0.33
DDX56-204ENST00000431640 CA3P07451 260 aa13□□□□□ -0.33
DDX56-204ENST00000431640 RALBP11234 206 aa13□□□□□ -0.33
DDX56-204ENST00000431640 FGF3P11487 239 aaPredicted RBP13□□□□□ -0.33
DDX56-204ENST00000431640 CCND1P24385 295 aa13□□□□□ -0.33
DDX56-204ENST00000431640 ARPP19P56211 112 aa13□□□□□ -0.33
DDX56-204ENST00000431640 TAF10Q12962 218 aa13□□□□□ -0.33
DDX56-204ENST00000431640 MGAT5BQ3V5L5 792 aa13□□□□□ -0.33
DDX56-204ENST00000431640 C10orf120Q5SQS8 335 aa13□□□□□ -0.33
DDX56-204ENST00000431640 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
DDX56-204ENST00000431640 DENND5AQ6IQ26 1287 aa13□□□□□ -0.33
DDX56-204ENST00000431640 PRSS55Q6UWB4 352 aaPredicted RBP13□□□□□ -0.33
DDX56-204ENST00000431640 CNTN4Q8IWV2 1026 aa13□□□□□ -0.33
DDX56-204ENST00000431640 FIBCD1Q8N539 461 aa13□□□□□ -0.33
DDX56-204ENST00000431640 DDX51Q8N8A6 666 aaKnown RBP eCLIP13□□□□□ -0.33
DDX56-204ENST00000431640 RDH11Q8TC12 318 aa13□□□□□ -0.33
DDX56-204ENST00000431640 SLC7A6OSQ96CW6 309 aaPredicted RBP13□□□□□ -0.33
DDX56-204ENST00000431640 TTPALQ9BTX7 342 aa13□□□□□ -0.33
DDX56-204ENST00000431640 TLE6Q9H808 572 aa13□□□□□ -0.33
DDX56-204ENST00000431640 NDFIP2Q9NV92 336 aa13□□□□□ -0.33
DDX56-204ENST00000431640 TMEM216Q9P0N5 145 aa13□□□□□ -0.33
DDX56-204ENST00000431640 STK38LQ9Y2H1 464 aa13□□□□□ -0.33
DDX56-204ENST00000431640 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
DDX56-204ENST00000431640 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
DDX56-204ENST00000431640 TRANK1O15050 2925 aa13□□□□□ -0.33
DDX56-204ENST00000431640 ADAM12O43184 909 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 SIN3BO75182 1162 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 C2P06681 752 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 ESRRAP11474 423 aaPredicted RBP12.99□□□□□ -0.33
DDX56-204ENST00000431640 MAPKAPK2P49137 400 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 TUFMP49411 452 aaKnown RBP12.99□□□□□ -0.33
DDX56-204ENST00000431640 ALDH7A1P49419 539 aaKnown RBP12.99□□□□□ -0.33
DDX56-204ENST00000431640 AQP5P55064 265 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 IRX4P78413 519 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 IL10RBQ08334 325 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 THOC5Q13769 683 aaKnown RBP12.99□□□□□ -0.33
DDX56-204ENST00000431640 PCLAFQ15004 111 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 PARP15Q460N3 678 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 PPM1JQ5JR12 505 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 CLEC14AQ86T13 490 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 TEX26Q8N6G2 289 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 AUTS2Q8WXX7 1259 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 IMP4Q96G21 291 aaKnown RBP12.99□□□□□ -0.33
DDX56-204ENST00000431640 VPS39Q96JC1 886 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 MRGPRX2Q96LB1 330 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 RANBP9Q96S59 729 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 GPR22Q99680 433 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 BTBD10Q9BSF8 475 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 PBX4Q9BYU1 374 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 MTIF3Q9H2K0 278 aaKnown RBP12.99□□□□□ -0.33
DDX56-204ENST00000431640 SP110Q9HB58 689 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 IL1RAPL1Q9NZN1 696 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 TRIM33Q9UPN9 1127 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 SLC27A5Q9Y2P5 690 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 REV3LO60673 3130 aa12.99□□□□□ -0.33
DDX56-204ENST00000431640 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 SLC12A8A0AV02 714 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 HEATR9A2RTY3 570 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 TMEM114B3SHH9 223 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 FCHO1O14526 889 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PMPCBO75439 489 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 VNN2O95498 520 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 CBX6O95503 412 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 ZDHHC11BP0C7U3 371 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 LAMB3Q13751 1172 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PSMD5Q16401 504 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 KIAA0930Q6ICG6 404 aaPredicted RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 FBXL22Q6P050 247 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 RNF19BQ6ZMZ0 732 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 KIAA0408Q6ZU52 694 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 LONP2Q86WA8 852 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 ZC3HC1Q86WB0 502 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 C10orf107Q8IVU9 208 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 KLHL23Q8NBE8 558 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 CALML6Q8TD86 181 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 OVCA2Q8WZ82 227 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 PTCD3Q96EY7 689 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 SEPT5Q99719 369 aaPredicted RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 FAM167BQ9BTA0 163 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 HERC2P3Q9BVR0 1158 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 TBC1D10AQ9BXI6 508 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 NOL6Q9H6R4 1146 aaKnown RBP12.98□□□□□ -0.33
DDX56-204ENST00000431640 NMRAL1Q9HBL8 299 aa12.98□□□□□ -0.33
DDX56-204ENST00000431640 MAGED2Q9UNF1 606 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms