RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PNPLA8Q9NP80 782 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 GALNT8Q9NY28 637 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 C1orf232A0A0U1RR37 186 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 GTF2H3Q13889 308 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 SQLEQ14534 574 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 TRIM16LQ309B1 348 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 PTRHD1Q6GMV3 140 aaKnown RBP12.77□□□□□ -0.36
CPNE4-201ENST00000429747 CAMK1DQ8IU85 385 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 HERC6Q8IVU3 1022 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 DENND6AQ8IWF6 608 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 FSTL5Q8N475 847 aaPredicted RBP12.77□□□□□ -0.36
CPNE4-201ENST00000429747 PTGR2Q8N8N7 351 aaPredicted RBP12.77□□□□□ -0.36
CPNE4-201ENST00000429747 RDH11Q8TC12 318 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 MAML3Q96JK9 1138 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 NSMCE2Q96MF7 247 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 GMLQ99445 158 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 VTA1Q9NP79 307 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.36
CPNE4-201ENST00000429747 DNAJB4Q9UDY4 337 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 BTRCQ9Y297 605 aa12.77□□□□□ -0.36
CPNE4-201ENST00000429747 A0A087X1B8 175 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 SMIM28A0A1B0GU29 152 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 STX7O15400 261 aaKnown RBP12.77□□□□□ -0.37
CPNE4-201ENST00000429747 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
CPNE4-201ENST00000429747 MT-CYBP00156 380 aaPredicted RBP12.77□□□□□ -0.37
CPNE4-201ENST00000429747 PIRTP0C851 137 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 DNAJB2P25686 324 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 PTPN3P26045 913 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 ZIK1Q3SY52 487 aaPredicted RBP12.77□□□□□ -0.37
CPNE4-201ENST00000429747 MBLAC2Q68D91 279 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 NCBP2-AS2Q69YL0 99 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 OLFML1Q6UWY5 402 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 DNAJC14Q6Y2X3 702 aaPredicted RBP12.77□□□□□ -0.37
CPNE4-201ENST00000429747 TRPC4APQ8TEL6 797 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 PRDM16Q9HAZ2 1276 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 RSL24D1Q9UHA3 163 aaKnown RBP12.77□□□□□ -0.37
CPNE4-201ENST00000429747 PPP2R3BQ9Y5P8 575 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 TADA2AO75478 443 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 ARMC3Q5W041 872 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 DLK2Q6UY11 383 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 CDCA5Q96FF9 252 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 KATNAL1Q9BW62 490 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 ASPSCR1Q9BZE9 553 aa12.77□□□□□ -0.37
CPNE4-201ENST00000429747 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 NEMP2A6NFY4 417 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 RPS6KA3P51812 740 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 PCLAFQ15004 111 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 NR6A1Q15406 480 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 ANKS6Q68DC2 871 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 SLC9A4Q6AI14 798 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 EFL1Q7Z2Z2 1120 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 CUZD1Q86UP6 607 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 FNDC5Q8NAU1 212 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 C9orf16Q9BUW7 83 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 RCOR3Q9P2K3 495 aaPredicted RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 CNTN6Q9UQ52 1028 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 KANSL1LA0AUZ9 987 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 A6NHS1 94 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 ENDOD1O94919 500 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 CD86P42081 329 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 TMED10P49755 219 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 ESRP1Q6NXG1 681 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 MOCOSQ96EN8 888 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 PCYT2Q99447 389 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 OSBPL11Q9BXB4 747 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 PCDHAC1Q9H158 963 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 POLR1BQ9H9Y6 1135 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 DMTF1Q9Y222 760 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 NRP2O60462 931 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 MGEA5O60502 916 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 RNASEH1O60930 286 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
CPNE4-201ENST00000429747 FKBP9O95302 570 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 SLC2A3P11169 496 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 FGFR1P11362 822 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 FCGR1AP12314 374 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 ETV4P43268 484 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 USP46P62068 366 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 CLDN10P78369 228 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 ZBTB17Q13105 803 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 PKN3Q6P5Z2 889 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 ZYG11AQ6WRX3 759 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 FKBP9P1Q75LS8 142 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 LZTR1Q8N653 840 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 NRG4Q8WWG1 115 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 LRTOMTQ8WZ04 291 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 BHMTQ93088 406 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 COLEC11Q9BWP8 271 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 SYTL2Q9HCH5 934 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 CASS4Q9NQ75 786 aa12.76□□□□□ -0.37
CPNE4-201ENST00000429747 FAM149AA5PLN7 773 aa12.75□□□□□ -0.37
CPNE4-201ENST00000429747 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
CPNE4-201ENST00000429747 VPS26AO75436 327 aa12.75□□□□□ -0.37
CPNE4-201ENST00000429747 PARNO95453 639 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms