RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PLPP6	Q8IY26	295 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	EID2	Q8N6I1	236 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	TMEM145	Q8NBT3	493 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	TSC1	Q92574	1164 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	COL26A1	Q96A83	441 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	VOPP1	Q96AW1	172 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	ISG20	Q96AZ6	181 aa	Known RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	MAGEH1	Q9H213	219 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	SEPT11	Q9NVA2	429 aa	Known RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	DNAI1	Q9UI46	699 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	RAI2	Q9Y5P3	530 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	PRAMEF26	H0Y7S4	382 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	RNGTT	O60942	597 aa	Known RBP	18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	C1QL1	O75973	258 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	CCDC172	P0C7W6	258 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	EPHA8	P29322	1005 aa	Predicted RBP	18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	RECQL	P46063	649 aa	Predicted RBP	18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	ACADVL	P49748	655 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	CCNH	P51946	323 aa	Predicted RBP	18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	RPL7A	P62424	266 aa	Known RBP	18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	CARD16	Q5EG05	197 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	ACAD10	Q6JQN1	1059 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	DNAJC24	Q6P3W2	148 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	FBXL19	Q6PCT2	694 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	SLFN11	Q7Z7L1	901 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	MCOLN2	Q8IZK6	566 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	OXR1	Q8N573	874 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	GRIN3A	Q8TCU5	1115 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	PPP1R16A	Q96I34	528 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	HEPH	Q9BQS7	1158 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	DYRK4	Q9NR20	520 aa		18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738	FCF1	Q9Y324	198 aa	Known RBP	18.06	■□□□□ 0.48
MRPL28-203	ENST00000429738		A0A1W2PQU0	124 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	MAGEC1	O60732	1142 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	ITGB7	P26010	798 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	L1CAM	P32004	1257 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	ARRB1	P49407	418 aa	Predicted RBP	18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	STAT4	Q14765	748 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	ZNF284	Q2VY69	593 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	HES3	Q5TGS1	186 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	KANSL1	Q7Z3B3	1105 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	HORMAD1	Q86X24	394 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	PYROXD2	Q8N2H3	581 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	VCPIP1	Q96JH7	1222 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	MCEE	Q96PE7	176 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	FUCA2	Q9BTY2	467 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	TAS2R14	Q9NYV8	317 aa		18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	ZFR2	Q9UPR6	939 aa	Known RBP	18.05	■□□□□ 0.48
MRPL28-203	ENST00000429738	ZNF462	Q96JM2	2506 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	SMTNL1	A8MU46	457 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	RAMP2	O60895	175 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	NEK3	P51956	506 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	AIF1	P55008	147 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	GEMIN4	P57678	1058 aa	Known RBP	18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	ILK	Q13418	452 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	TMEM259	Q4ZIN3	620 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	SFMBT2	Q5VUG0	894 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	CACTIN-AS1	Q8N1I8	211 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	RTL3	Q8N8U3	475 aa	Known RBP	18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	SNIP1	Q8TAD8	396 aa	Known RBP	18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	FGF11	Q92914	225 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	CNPY3	Q9BT09	278 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	NOL6	Q9H6R4	1146 aa	Known RBP	18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	FZD10	Q9ULW2	581 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	CA5B	Q9Y2D0	317 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738	CFAP46	Q8IYW2	2715 aa		18.04	■□□□□ 0.48
MRPL28-203	ENST00000429738		A0A1B0GTH6	734 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	LRRC53	A6NM62	1247 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	WASH4P	A8MWX3	477 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	SLC31A1	O15431	190 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	KDELR3	O43731	214 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	ADRB3	P13945	408 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	OGDH	Q02218	1023 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	BNIP3	Q12983	259 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	POLD3	Q15054	466 aa	Predicted RBP	18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	EFHC2	Q5JST6	749 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	PPP1R2P3	Q6NXS1	205 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	CAVIN1	Q6NZI2	390 aa	Known RBP	18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	PARS2	Q7L3T8	475 aa	Known RBP	18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	FCRL3	Q96P31	734 aa	Predicted RBP	18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	TM6SF2	Q9BZW4	377 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	TTYH3	Q9C0H2	523 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	FADS3	Q9Y5Q0	445 aa		18.03	■□□□□ 0.48
MRPL28-203	ENST00000429738	TDRD6	O60522	2096 aa	Known RBP	18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738		A0A1W2PQC6	194 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	ANKRD62	A6NC57	917 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	AP1G1	O43747	822 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	GSR	P00390	522 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	PRLR	P16471	622 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	CKMT2	P17540	419 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	TNFAIP3	P21580	790 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	HNRNPA2B1	P22626	353 aa	Known RBP	18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	EPHB2	P29323	1055 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	PRKCI	P41743	596 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	ZNF165	P49910	485 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	DNA2	P51530	1060 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	MAMLD1	Q13495	774 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	IQCB1	Q15051	598 aa		18.02	■□□□□ 0.48
MRPL28-203	ENST00000429738	E4F1	Q66K89	784 aa	Predicted RBP	18.02	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms