RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SP140Q13342 867 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TOP3AQ13472 1001 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 AQP6Q13520 282 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 CEACAM7Q14002 265 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 RFTN1Q14699 578 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 MAPK11Q15759 364 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 KIZQ2M2Z5 673 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 FBXO43Q4G163 708 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PAGE2BQ5JRK9 111 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 CCNYL2Q5T2Q4 361 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 LETMD1Q6P1Q0 360 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PRR23BQ6ZRT6 265 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SPATC1Q76KD6 591 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PIWIL3Q7Z3Z3 882 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 LINC00523Q86TU6 105 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TBC1D21Q8IYX1 336 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 DSELQ8IZU8 1212 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SFRP1Q8N474 314 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 POC5Q8NA72 575 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TMEM35BQ8NCS4 154 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 BPIFB6Q8NFQ5 453 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF564Q8TBZ8 553 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 LRTOMTQ8WZ04 291 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 GTF2H4Q92759 462 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC35C1Q96A29 364 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 VTI1AQ96AJ9 217 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ST6GAL2Q96JF0 529 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 APOL6Q9BWW8 343 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 C20orf27Q9GZN8 174 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TMEM168Q9H0V1 697 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF395Q9H8N7 513 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF556Q9HAH1 456 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 MRPL40Q9NQ50 206 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SEPT11Q9NVA2 429 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 B3GNT2Q9NY97 397 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 CACNG2Q9Y698 323 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 KCNE2Q9Y6J6 123 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ATRNL1Q5VV63 1379 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 F8W810 466 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 H3BMM5 538 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 DLGAP1O14490 977 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 GLRA2P23416 452 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC7A1P30825 629 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PRKAR1BP31321 381 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 HSPA1LP34931 641 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 HSD17B2P37059 387 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TECP42680 631 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ENPEPQ07075 957 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 HIF1AQ16665 826 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 MTX3Q5HYI7 312 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 BROXQ5VW32 411 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 DRICH1Q6PGQ1 229 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ARSKQ6UWY0 536 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 CHSY3Q70JA7 882 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 LIMS2Q7Z4I7 341 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 PM20D2Q8IYS1 436 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 KCTD4Q8WVF5 259 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SEPT8Q92599 483 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SNAPC3Q92966 411 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 ATP6V1E2Q96A05 226 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 CCDC120Q96HB5 630 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 MECRQ9BV79 373 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 BTBD2Q9BX70 525 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 MUC3BQ9H195 1237 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SEMA6AQ9H2E6 1030 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TM9SF3Q9HD45 589 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 GLTPQ9NZD2 209 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 TMEM216Q9P0N5 145 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 KLF2Q9Y5W3 355 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 GOLGB1Q14789 3259 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-206ENST00000429440 LTBP1Q14766 1721 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 UBE4BO95155 1302 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 TRAV6A0A075B6T7 132 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC22A2O15244 555 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 SEMA3DO95025 777 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 SSTR1P30872 391 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 HTR7P34969 479 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 NPY2RP49146 381 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 NUMBP49757 651 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 NUDT2P50583 147 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 FXR2P51116 673 aaKnown RBP eCLIP8.96□□□□□ -0.971e-6■■■■■ 32.8
CDC42BPA-206ENST00000429440 TAF12Q16514 161 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 DDR2Q16832 855 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 TMEM119Q4V9L6 283 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 ALFQ53S48 1182 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 Q5BKY6 102 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 GRTP1Q5TC63 336 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 XAF1Q6GPH4 301 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 XKRXQ6PP77 449 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 CDHR3Q6ZTQ4 885 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 HID1Q8IV36 788 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 ARHGEF19Q8IW93 802 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 UBQLNLQ8IYU4 475 aa8.96□□□□□ -0.97
CDC42BPA-206ENST00000429440 SVOPQ8N4V2 548 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms