RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TIFAQ96CG3 184 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 P2RY11Q96G91 374 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 C9IYK1 514 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 CYP1A1P04798 512 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 IRF8Q02556 426 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 TBX2Q13207 712 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 TAF8Q7Z7C8 310 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 MTFMTQ96DP5 389 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 KRT16P08779 473 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 CSPG4P5Q96PW8 444 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 PTPN18Q99952 460 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 ZNF556Q9HAH1 456 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 ADGRA3Q8IWK6 1321 aa17.27■□□□□ 0.36
SMARCA4-203ENST00000429416 SOD2P04179 222 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 ANXA5P08758 320 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 MC4RP32245 332 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 GRM2Q14416 872 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 PDGFRLQ15198 375 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 CYP51A1Q16850 503 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 SEL1L3Q68CR1 1132 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 PARGQ86W56 976 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 C12orf76Q8N812 135 aaPredicted RBP17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 BBS4Q96RK4 519 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 DPEP2Q9H4A9 486 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 MID1IP1Q9NPA3 183 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 RAI2Q9Y5P3 530 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 CDK14O94921 469 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 TEAD2Q15562 447 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 CYP20A1Q6UW02 462 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 BBS12Q6ZW61 710 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 IGSF21Q96ID5 467 aa17.27■□□□□ 0.35
SMARCA4-203ENST00000429416 hCG_1818297A0A087WSY0 165 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 FGF1P05230 155 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 STXBP5Q5T5C0 1151 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 SCARA3Q6AZY7 606 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 GLMNQ92990 594 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 CMTM5Q96DZ9 223 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 IL12RB2Q99665 862 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 ACAT2Q9BWD1 397 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 MRGBPQ9NV56 204 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 TMEM114B3SHH9 223 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 QSOX1O00391 747 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 KPNA5O15131 536 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 LRIG2O94898 1065 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 RPL22P35268 128 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 ZNF280BQ86YH2 543 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 ICA1LQ8NDH6 482 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 REPS1Q96D71 796 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 NDNQ99608 321 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 SLC24A2Q9UI40 661 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 NR2E1Q9Y466 385 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 LIASO43766 372 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM9CQ8IZT9 166 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 HDAC10Q969S8 669 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 COL26A1Q96A83 441 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 GALTP07902 379 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 YBEYP58557 167 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 PAGE2BQ5JRK9 111 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 MS4A4AQ96JQ5 239 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 CD84Q9UIB8 345 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 MTO1Q9Y2Z2 717 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 WNT6Q9Y6F9 365 aa17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 COL16A1Q07092 1604 aaPredicted RBP17.26■□□□□ 0.35
SMARCA4-203ENST00000429416 SEC22BO75396 215 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 BMP10O95393 424 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 GNSP15586 552 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CDK16Q00536 496 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 UNC5AQ6ZN44 842 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 HDDC3Q8N4P3 179 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CELF5Q8N6W0 485 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ZNF461Q8TAF7 563 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 BPIFB1Q8TDL5 484 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 HEPHQ9BQS7 1158 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■□□□□ 11.2
SMARCA4-203ENST00000429416 PCDHGC4Q9Y5F7 938 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 NUDT14O95848 222 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 HLA-DPA1P20036 260 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 SERPINB5P36952 375 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 GPR15P49685 360 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 RERGQ96A58 199 aaPredicted RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ERP27Q96DN0 273 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CCSER2Q9H7U1 834 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 TDP1Q9NUW8 608 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CNTN3Q9P232 1028 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 RPS6KB2Q9UBS0 482 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 AKAP10O43572 662 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 SERPINB4P48594 390 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 ZC3H12BQ5HYM0 836 aaKnown RBP17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 OR56A4Q8NGH8 313 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 AP2M1Q96CW1 435 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 SAMD11Q96NU1 681 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 MCOLN1Q9GZU1 580 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 GMEB2Q9UKD1 530 aa17.25■□□□□ 0.35
SMARCA4-203ENST00000429416 INSL5Q9Y5Q6 135 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms