RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 WASP42768 502 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 MAPK8P45983 427 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 RPL21P46778 160 aaKnown RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 RGRP47804 291 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 SCNN1BP51168 640 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 CCNHP51946 323 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 AP1S1P61966 158 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 NIPAL4Q0D2K0 466 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 CALCOCO2Q13137 446 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 SEMA5AQ13591 1074 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 LRRC32Q14392 662 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 HLTFQ14527 1009 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 PCSK7Q16549 785 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 HNRNPA1L2Q32P51 320 aaKnown RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 C2orf27AQ580R0 203 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 DGKKQ5KSL6 1271 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 SYCP2LQ5T4T6 812 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 EMC10Q5UCC4 262 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 SDE2Q6IQ49 451 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 IFT20Q8IY31 132 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 BBOF1Q8ND07 529 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 IPMKQ8NFU5 416 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 OR2AP1Q8NGE2 309 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 SPATA22Q8NHS9 363 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 GRIN3AQ8TCU5 1115 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 IFT81Q8WYA0 676 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 EZH1Q92800 747 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ISG20Q96AZ6 181 aaKnown RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ERLEC1Q96DZ1 483 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 IMP4Q96G21 291 aaKnown RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 OXNAD1Q96HP4 312 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 FCRL5Q96RD9 977 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 NUDCD1Q96RS6 583 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 RBM15Q96T37 977 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ACOX2Q99424 681 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 FSD1LQ9BXM9 530 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 MTG2Q9H4K7 406 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZDHHC6Q9H6R6 413 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 NOD2Q9HC29 1040 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 EPB41L5Q9HCM4 733 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 CD320Q9NPF0 282 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 UBP1Q9NZI7 540 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 THAP10Q9P2Z0 257 aaPredicted RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 WNT16Q9UBV4 365 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 DMGDHQ9UI17 866 aaKnown RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 ATP8A1Q9Y2Q0 1164 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 MRPS17Q9Y2R5 130 aaKnown RBP8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 SNX24Q9Y343 169 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 STON1Q9Y6Q2 735 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 COL4A2P08572 1712 aa8.02□□□□□ -1.13
HMGA1P4-201ENST00000428643 TARSL2A2RTX5 802 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 KRBA1A5PL33 1030 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ANTXRLA6NF34 631 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 GOLGA8MH3BSY2 632 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 DNALI1O14645 258 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 NPC1O15118 1278 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 INSIG1O15503 277 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SYNCRIPO60506 623 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SEC31AO94979 1220 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 MT-CYBP00156 380 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 EPHX1P07099 455 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SERPINF2P08697 491 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 HOXB2P14652 356 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 CES1P23141 567 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 TARSP26639 723 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 IL12RB1P42701 662 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 KIR2DL1P43626 348 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 VASPP50552 380 aaPredicted RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ITGA8P53708 1063 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 GEMP55040 296 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 WNT3AP56704 352 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SKOR1P84550 965 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 RAD51Q06609 339 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 CUL1Q13616 776 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SPARCL1Q14515 664 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ELAVL3Q14576 367 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 STARD3Q14849 445 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 MORF4L2Q15014 288 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ELF2Q15723 593 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ERCC6LQ2NKX8 1250 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FBXO43Q4G163 708 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 CARD16Q5EG05 197 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 CFAP58Q5T655 872 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 RNASEH2BQ5TBB1 312 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 DUPD1Q68J44 220 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ALG1LQ6GMV1 187 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 PPP1R21Q6ZMI0 780 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 DPY19L3Q6ZPD9 716 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 TRMT11Q7Z4G4 463 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 PCGF5Q86SE9 256 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 DSG4Q86SJ6 1040 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 SRLQ86TD4 932 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 PRPF39Q86UA1 669 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 PPIL6Q8IXY8 311 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 PDCD7Q8N8D1 485 aaKnown RBP8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 KDM1BQ8NB78 822 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 ARRDC2Q8TBH0 407 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 FRS2Q8WU20 508 aa8.01□□□□□ -1.13
HMGA1P4-201ENST00000428643 PDCD6IPQ8WUM4 868 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms