RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 SPECC1LQ69YQ0 1117 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 NAPEPLDQ6IQ20 393 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 ALKBH5Q6P6C2 394 aaKnown RBP13.34□□□□□ -0.27
PHF1-205ENST00000428274 RFX8Q6ZV50 586 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 PRPF39Q86UA1 669 aaKnown RBP13.34□□□□□ -0.27
PHF1-205ENST00000428274 NAXDQ8IW45 347 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 NIPA2Q8N8Q9 360 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 OR2AP1Q8NGE2 309 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 PPP1R16AQ96I34 528 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 DNAJC7Q99615 494 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 TM6SF2Q9BZW4 377 aa13.34□□□□□ -0.27
PHF1-205ENST00000428274 ANKRD36A6QL64 1941 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 PKD1L2Q7Z442 2459 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 H0Y8X5 98 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 EEF2KO00418 725 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 KCNK3O14649 394 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 PCDHGA12O60330 932 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 DFNA5O60443 496 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 RNGTTO60942 597 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 TMCC1O94876 653 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 POP4O95707 220 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 TCF4P15884 667 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 MAT2AP31153 395 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 GKP32189 559 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 EIF4A3P38919 411 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 ZNF135P52742 658 aaPredicted RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 SNRPD1P62314 119 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 PIGHQ14442 188 aaPredicted RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 DPYSL2Q16555 572 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 ASTE1Q2TB18 679 aaPredicted RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 ZNF284Q2VY69 593 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 SETMARQ53H47 684 aaPredicted RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 BOLA3Q53S33 107 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 ADAT2Q7Z6V5 191 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 IQCHQ86VS3 1027 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 HORMAD1Q86X24 394 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 VSTM4Q8IW00 320 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 MFSD2AQ8NA29 543 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 OR8K1Q8NGG5 319 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 BAHD1Q8TBE0 780 aaPredicted RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 SKA1Q96BD8 255 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 NUP85Q9BW27 656 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 ZDHHC6Q9H6R6 413 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 PDFQ9HBH1 243 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 DYRK4Q9NR20 520 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 AASDHPPTQ9NRN7 309 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.28
PHF1-205ENST00000428274 PCOLCE2Q9UKZ9 415 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 MFHAS1Q9Y4C4 1052 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 WDFY3Q8IZQ1 3526 aa13.33□□□□□ -0.28
PHF1-205ENST00000428274 LRRK1Q38SD2 2015 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 APC2O95996 2303 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 A0A1B0GTQ1 180 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 A0A1W2PQU0 124 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 TLR4O00206 839 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 AP1G1O43747 822 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 HYAL3O43820 417 aaPredicted RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 PRAMEF11O60813 436 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 ADRB3P13945 408 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 ERCC2P18074 760 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 NEK3P51956 506 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 C21orf59P57076 290 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 NXPH1P58417 271 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 SIM1P81133 766 aaPredicted RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 DPYSQ14117 519 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 TRIM14Q14142 442 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 CYTH1Q15438 398 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 ZNF805Q5CZA5 627 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 ATXN7L2Q5T6C5 722 aaPredicted RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 PARS2Q7L3T8 475 aaKnown RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 TMEM145Q8NBT3 493 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 RNF214Q8ND24 703 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 OR6K2Q8NGY2 324 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 SLC39A8Q9C0K1 460 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 IP6K2Q9UHH9 426 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 RALYQ9UKM9 306 aaKnown RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
PHF1-205ENST00000428274 FADS3Q9Y5Q0 445 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 SHROOM3Q8TF72 1996 aa13.32□□□□□ -0.28
PHF1-205ENST00000428274 ZFYVE26Q68DK2 2539 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 C16orf96A6NNT2 1141 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 PRAMEF26H0Y7S4 382 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 J3KR12 359 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 KRIT1O00522 736 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 FLRT2O43155 660 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 RARAP10276 462 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 CCT8P50990 548 aa13.31□□□□□ -0.28
PHF1-205ENST00000428274 PAPOLAP51003 745 aaKnown RBP13.31□□□□□ -0.28
PHF1-205ENST00000428274 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
PHF1-205ENST00000428274 OVGP1Q12889 678 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms