RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 LRIG2O94898 1065 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 UNGP13051 313 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 MYF5P13349 255 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 SDC4P31431 198 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 ETFBP38117 255 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 PTPN9P43378 593 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 GSCP56915 257 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 DAB2P98082 770 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 KRT31Q15323 416 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 CDCP2Q5VXM1 449 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 RWDD4Q6NW29 188 aaKnown RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 STRADAQ7RTN6 431 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 PTAR1Q7Z6K3 402 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 DCP2Q8IU60 420 aaKnown RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 CCDC185Q8N715 623 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 FAM181AQ8N9Y4 354 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 OR6K2Q8NGY2 324 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 APOLD1Q96LR9 279 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 LENG8Q96PV6 779 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 VPS16Q9H269 839 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 ZDHHC6Q9H6R6 413 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 FAM207AQ9NSI2 230 aaPredicted RBP13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 NLGN3Q9NZ94 848 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 DNAI1Q9UI46 699 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 KLF15Q9UIH9 416 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 GGT7Q9UJ14 662 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 SIK3Q9Y2K2 1263 aa13.28□□□□□ -0.28
DEPDC7-203ENST00000427755 BAHCC1Q9P281 2608 aa13.27□□□□□ -0.28
DEPDC7-203ENST00000427755 LOC400499M0QZD8 3231 aa13.27□□□□□ -0.28
DEPDC7-203ENST00000427755 FASNP49327 2511 aaKnown RBP13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 SPTY2D1-AS1A0A0U1RR47 76 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 IGLON5A6NGN9 336 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 C16orf96A6NNT2 1141 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 K7ESM1 405 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 BRINP1O60477 761 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 GSRP00390 522 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 CSF2P04141 144 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 PLEKP08567 350 aaPredicted RBP13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 NME1P15531 152 aaKnown RBP13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 ARL13BQ3SXY8 428 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 ZNF805Q5CZA5 627 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 KDM7AQ6ZMT4 941 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 TRIM72Q6ZMU5 477 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 ZSCAN30Q86W11 494 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 ASB12Q8WXK4 309 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 RAB7BQ96AH8 199 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 MAGEH1Q9H213 219 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 PRORYQ9H606 182 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 NOL6Q9H6R4 1146 aaKnown RBP13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 NLRC4Q9NPP4 1024 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 DNAJC28Q9NX36 388 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 ITM2BQ9Y287 266 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 PCDHB1Q9Y5F3 818 aa13.27□□□□□ -0.29
DEPDC7-203ENST00000427755 TCRBV5S1A1TA0A578 114 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 AREL1O15033 823 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 TSPAN6O43657 245 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 OPA1O60313 960 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 RAMP2O60895 175 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 NEBLO76041 1014 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 GP1BAP07359 652 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 RFC1P35251 1148 aaPredicted RBP13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 RABIFP47224 123 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 GEMIN4P57678 1058 aaKnown RBP13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 PFN3P60673 137 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 HNRNPKP61978 463 aaKnown RBP eCLIP13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 MYLK3Q32MK0 819 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 LEKR1Q6ZMV7 388 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 PARGQ86W56 976 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 ZNF548Q8NEK5 533 aaPredicted RBP13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 FAM172AQ8WUF8 416 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 FGF11Q92914 225 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 NTAN1Q96AB6 310 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 DUSP23Q9BVJ7 150 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 LMBRD1Q9NUN5 540 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 DAAM1Q9Y4D1 1078 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 RAI2Q9Y5P3 530 aa13.26□□□□□ -0.29
DEPDC7-203ENST00000427755 NEMP2A6NFY4 417 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 KRIT1O00522 736 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 KDELR3O43731 214 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 POP4O95707 220 aaKnown RBP13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 UGT2B4P06133 528 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 ALPPL2P10696 532 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 KRT3P12035 628 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 STAT1P42224 750 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 SNRPD1P62314 119 aaKnown RBP13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 EIF2B5Q13144 721 aaKnown RBP13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 SGCGQ13326 291 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 POLD3Q15054 466 aaPredicted RBP13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 CLEC16AQ2KHT3 1053 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 ATXN7L2Q5T6C5 722 aaPredicted RBP13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 WDR59Q6PJI9 974 aa13.25□□□□□ -0.29
DEPDC7-203ENST00000427755 RBM43Q6ZSC3 357 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms