RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 SNX11Q9Y5W9 270 aa15.12■□□□□ 0.01
RTN4-210ENST00000427710 GOLGA4Q13439 2230 aaKnown RBP15.12■□□□□ 0.01
RTN4-210ENST00000427710 ZSCAN5CA6NGD5 496 aaPredicted RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 ARHGAP42A6NI28 874 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 H3BRJ5 948 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 SLC7A4O43246 635 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 OPHN1O60890 802 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 RNGTTO60942 597 aaKnown RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 GSRP00390 522 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 UGT2B4P06133 528 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 CCR5P51681 352 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 CDH6P55285 790 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 GEMIN4P57678 1058 aaKnown RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 RHOAP61586 193 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 SNRPD1P62314 119 aaKnown RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 KRT81Q14533 505 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 MESDQ14696 234 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 DPYSL2Q16555 572 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 MYLK3Q32MK0 819 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 BOLA3Q53S33 107 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 LRRC73Q5JTD7 316 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 AFMIDQ63HM1 303 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 PSAPL1Q6NUJ1 521 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 ERN2Q76MJ5 926 aaKnown RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 ERMP1Q7Z2K6 904 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 ADAT2Q7Z6V5 191 aaKnown RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 PSTKQ8IV42 348 aaKnown RBP15.11■□□□□ 0.01
RTN4-210ENST00000427710 CNGA4Q8IV77 575 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 OR2AP1Q8NGE2 309 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 VOPP1Q96AW1 172 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 SERAC1Q96JX3 654 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 CSPG4P5Q96PW8 444 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 NCAPGQ9BPX3 1015 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 GAREM1Q9H706 876 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 PDFQ9HBH1 243 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 AASDHPPTQ9NRN7 309 aa15.11■□□□□ 0.01
RTN4-210ENST00000427710 A0A1W2PQU0 124 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 EIF3CLB5ME19 914 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 PRAMEF11O60813 436 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 PROSCO94903 275 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 PCDH8O95206 1070 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 KCNK5O95279 499 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 TMEM253P0C7T8 217 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 PRLRP16471 622 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 ARL4AP40617 200 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 ABL2P42684 1182 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 NOVA1P51513 510 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 AFF3P51826 1226 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 TEAD4Q15561 434 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 HLA-BQ31612 363 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 PRAMEF14Q5SWL7 426 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 PRPF39Q86UA1 669 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 SLC35G2Q8TBE7 412 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 TEKT4Q8WW24 435 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 KLHL32Q96NJ5 620 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 CAMK1GQ96NX5 476 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 EIF3CQ99613 913 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 HDAC8Q9BY41 377 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 SP110Q9HB58 689 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 UVRAGQ9P2Y5 699 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 GGT7Q9UJ14 662 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 TFR2Q9UP52 801 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 ZFR2Q9UPR6 939 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 ITM2BQ9Y287 266 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 ANKRD6Q9Y2G4 727 aa15.1■□□□□ 0.01
RTN4-210ENST00000427710 FNDC3AQ9Y2H6 1198 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 TPRP12270 2363 aaKnown RBP15.1■□□□□ 0.01
RTN4-210ENST00000427710 C16orf96A6NNT2 1141 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 SLC31A1O15431 190 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 GJB3O75712 270 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 PIGNO95427 931 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 POP4O95707 220 aaKnown RBP15.09■□□□□ 0.01
RTN4-210ENST00000427710 IGSF6O95976 241 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 ADRB3P13945 408 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 CD59P13987 128 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 ITIH2P19823 946 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 ITGB7P26010 798 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 RGRP47804 291 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 HCAR3P49019 387 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 NEK3P51956 506 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 RACK1P63244 317 aaKnown RBP15.09■□□□□ 0.01
RTN4-210ENST00000427710 IL9RQ01113 521 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 N4BP2L1Q5TBK1 243 aaPredicted RBP15.09■□□□□ 0.01
RTN4-210ENST00000427710 SEL1L3Q68CR1 1132 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 FBXL19Q6PCT2 694 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 TSC1Q92574 1164 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 PPP1R16AQ96I34 528 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 GDAP1L1Q96MZ0 367 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 PREBQ9HCU5 417 aa15.09■□□□□ 0.01
RTN4-210ENST00000427710 DNAAF2Q9NVR5 837 aaKnown RBP15.09■□□□□ 0.01
RTN4-210ENST00000427710 CXorf51AA0A1B0GTR3 108 aa15.08■□□□□ 0
RTN4-210ENST00000427710 A0A1W2PR77 199 aa15.08■□□□□ 0
RTN4-210ENST00000427710 TTC24A2A3L6 582 aaPredicted RBP15.08■□□□□ 0
RTN4-210ENST00000427710 H0Y8X5 98 aa15.08■□□□□ 0
RTN4-210ENST00000427710 LATO43561 262 aa15.08■□□□□ 0
RTN4-210ENST00000427710 SH3BP5O60239 455 aa15.08■□□□□ 0
RTN4-210ENST00000427710 IL4RP24394 825 aa15.08■□□□□ 0
RTN4-210ENST00000427710 GRIA4P48058 902 aa15.08■□□□□ 0
RTN4-210ENST00000427710 ARSEP51690 589 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms