RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SUN2Q9UH99 717 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 VPS51Q9UID3 782 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 PYCARDQ9ULZ3 195 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 ACTL7AQ9Y615 435 aa7.57□□□□□ -1.2
LINC01049-201ENST00000426840 GPC6Q9Y625 555 aaPredicted RBP7.57□□□□□ -1.2
LINC01049-201ENST00000426840 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 J3KR12 359 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 K7ERQ8 282 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 CBX4O00257 560 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 EFSO43281 561 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SMAD6O43541 496 aaKnown RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF821O75541 412 aaPredicted RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ZRANB2O95218 330 aaKnown RBP eCLIP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 FTCDO95954 541 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 KRT1P04264 644 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SRCP12931 536 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 HLA-EP13747 358 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ETFBP38117 255 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 CDKN2BP42772 138 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 PAPOLAP51003 745 aaKnown RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ST8SIA6P61647 398 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 CSTF1Q05048 431 aaKnown RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ADCY2Q08462 1091 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 DMWDQ09019 674 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 DLG2Q15700 870 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SWI5Q1ZZU3 235 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 PARP15Q460N3 678 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 FNDC3BQ53EP0 1204 aaKnown RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 C9orf64Q5T6V5 341 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 NCBP2-AS2Q69YL0 99 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SLC9A4Q6AI14 798 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 IL31Q6EBC2 164 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 TSSK4Q6SA08 328 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 TMCO3Q6UWJ1 677 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SERPINA13PQ6UXR4 307 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 LINGO4Q6UY18 593 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SPOCD1Q6ZMY3 1216 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 PEX26Q7Z412 305 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SYCE1Q8N0S2 351 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SH2D3CQ8N5H7 860 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 CAMKK1Q8N5S9 505 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF366Q8N895 744 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 GALNT6Q8NCL4 622 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 EXD1Q8NHP7 514 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 UBE2Q2Q8WVN8 375 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 ALG3Q92685 438 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 NELL1Q92832 810 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 HES6Q96HZ4 224 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 FAM129BQ96TA1 746 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 BRD7Q9NPI1 651 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 PRSS16Q9NQE7 514 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 FBXO4Q9UKT5 387 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 AMFRQ9UKV5 643 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 PACSIN2Q9UNF0 486 aaPredicted RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 SLC8A2Q9UPR5 921 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 HS3ST2Q9Y278 367 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 RAD54BQ9Y620 910 aa7.56□□□□□ -1.2
LINC01049-201ENST00000426840 DNMT3AQ9Y6K1 912 aaPredicted RBP7.56□□□□□ -1.2
LINC01049-201ENST00000426840 hCG_1818297A0A087WSY0 165 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 TARSL2A2RTX5 802 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ARHGAP42A6NI28 874 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 USP27XA6NNY8 438 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 MIF4GDA9UHW6 222 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 MAFKO60675 156 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PRAMEF11O60813 436 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 SIN3BO75182 1162 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PEX11BO96011 259 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 EPHX1P07099 455 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 SP9P0CG40 484 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PYGMP11217 842 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 KRT10P13645 584 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 HOXB2P14652 356 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 VAV1P15498 845 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 GABRG2P18507 467 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 NNMTP40261 264 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 DGKEP52429 567 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 COPAP53621 1224 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 RWDD2BP57060 319 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 GBE1Q04446 702 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 IL10RBQ08334 325 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 TCF15Q12870 199 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 LLGL1Q15334 1064 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ANGPT1Q15389 498 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 CYTH1Q15438 398 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 HNRNPA1L2Q32P51 320 aaKnown RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ZNF528Q3MIS6 628 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 INO80DQ53TQ3 878 aaPredicted RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ZFYVE27Q5T4F4 411 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 MEI1Q5TIA1 1274 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 RETSATQ6NUM9 610 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 AADACL2Q6P093 401 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 LEKR1Q6ZMV7 388 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 ARHGAP36Q6ZRI8 547 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 RAB44Q7Z6P3 723 aaPredicted RBP7.55□□□□□ -1.2
LINC01049-201ENST00000426840 RASSF3Q86WH2 238 aa7.55□□□□□ -1.2
LINC01049-201ENST00000426840 PLD5Q8N7P1 536 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms