RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
GPC1-204ENST00000426280 EEF2KO00418 725 aaKnown RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 SLC31A1O15431 190 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 SLC7A4O43246 635 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 TMCC1O94876 653 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 PRNPP04156 253 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 RARAP10276 462 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 CD38P28907 300 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 PAPOLAP51003 745 aaKnown RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 AIF1P55008 147 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 CLDN2P57739 230 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 YBEYP58557 167 aaPredicted RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 SIM1P81133 766 aaPredicted RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 BNIP3Q12983 259 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 RFX8Q6ZV50 586 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 PARS2Q7L3T8 475 aaKnown RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 VPS36Q86VN1 386 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 ZNF354CQ86Y25 554 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 NAXDQ8IW45 347 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 OR2AP1Q8NGE2 309 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 BAHD1Q8TBE0 780 aaPredicted RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 EXOC2Q96KP1 924 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 KLHL32Q96NJ5 620 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 NUP85Q9BW27 656 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 HDAC8Q9BY41 377 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 KDM4CQ9H3R0 1056 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 DEF6Q9H4E7 631 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 RETREG1Q9H6L5 497 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 ZWILCHQ9H900 591 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 NHEJ1Q9H9Q4 299 aaPredicted RBP12.95□□□□□ -0.34
GPC1-204ENST00000426280 PCOLCE2Q9UKZ9 415 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 FADS3Q9Y5Q0 445 aa12.95□□□□□ -0.34
GPC1-204ENST00000426280 A0A1B0GTQ1 180 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 SSU72P8A0A1W2PR75 194 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TTC24A2A3L6 582 aaPredicted RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 TLR4O00206 839 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 KRIT1O00522 736 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 MUSKO15146 869 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 AKR1B10O60218 316 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 PRPSAP2O60256 369 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 BUB1BO60566 1050 aaPredicted RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 RNF8O76064 485 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 GSRP00390 522 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 UGT2B4P06133 528 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 CD48P09326 243 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 MYBL1P10243 752 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 ADRB3P13945 408 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 IL4RP24394 825 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 RECQLP46063 649 aaPredicted RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 NXPH1P58417 271 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TAS2R40P59535 323 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 SEMG2Q02383 582 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 SLC25A11Q02978 314 aaKnown RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 SFSWAPQ12872 951 aaKnown RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 SLC14A1Q13336 389 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 DPYSQ14117 519 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TEAD4Q15561 434 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TRIP6Q15654 476 aaKnown RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TPRG1LQ5T0D9 272 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 FAM182AQ5T1J6 154 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 NAPEPLDQ6IQ20 393 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 PPP1R2P3Q6NXS1 205 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 PRPF39Q86UA1 669 aaKnown RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TMEM145Q8NBT3 493 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 HSPH1Q92598 858 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 BMFQ96LC9 184 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 CATSPERBQ9H7T0 1116 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 TOR4AQ9NXH8 423 aa12.94□□□□□ -0.34
GPC1-204ENST00000426280 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
GPC1-204ENST00000426280 C16orf96A6NNT2 1141 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PRAMEF11O60813 436 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PCDH8O95206 1070 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PIGNO95427 931 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 CER1O95813 267 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PAK4O96013 591 aaPredicted RBP12.93□□□□□ -0.34
GPC1-204ENST00000426280 ATXN1LP0C7T5 689 aaKnown RBP12.93□□□□□ -0.34
GPC1-204ENST00000426280 ZNF883P0CG24 379 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 TIMP2P16035 220 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 ITGB7P26010 798 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 PCK1P35558 622 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 ETFBP38117 255 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 ARSEP51690 589 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 SLC18A3Q16572 532 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 IL27RAQ6UWB1 636 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 KANSL1Q7Z3B3 1105 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 POLNQ7Z5Q5 900 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 ADAT2Q7Z6V5 191 aaKnown RBP12.93□□□□□ -0.34
GPC1-204ENST00000426280 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 ZSWIM9Q86XI8 627 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 MARCH9Q86YJ5 346 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 CHCHD4Q8N4Q1 142 aa12.93□□□□□ -0.34
GPC1-204ENST00000426280 RHBDD1Q8TEB9 315 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms