RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 FOXC1Q12948 553 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 FGL2Q14314 439 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 ACAP1Q15027 740 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 NFKBIBQ15653 356 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 CCDC122Q5T0U0 273 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 SEL1L3Q68CR1 1132 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 PARS2Q7L3T8 475 aaKnown RBP18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 HORMAD1Q86X24 394 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 TP53INP2Q8IXH6 220 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 MFSD2AQ8NA29 543 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 TMEM145Q8NBT3 493 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 EIF3CQ99613 913 aaKnown RBP18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 DYRK4Q9NR20 520 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 DMTF1Q9Y222 760 aa18.63■□□□□ 0.57
SMARCAL1-205ENST00000425815 SLC31A1O15431 190 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 PCDHGA12O60330 932 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 NUDT1P36639 197 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 EIF4A3P38919 411 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 ABL2P42684 1182 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 HCAR3P49019 387 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 PAPOLAP51003 745 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 NEK3P51956 506 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 SNRPD1P62314 119 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 IL9RQ01113 521 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 CCDC15Q0P6D6 951 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 HNRNPDQ14103 355 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 DPYSQ14117 519 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 TMEM259Q4ZIN3 620 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 ZNF805Q5CZA5 627 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 SPECC1LQ69YQ0 1117 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 ZNF354CQ86Y25 554 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 NPWQ8N729 165 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 SETD7Q8WTS6 366 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 CASKIN2Q8WXE0 1202 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 PPP1R16AQ96I34 528 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 LRIG1Q96JA1 1093 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 ELF4Q99607 663 aaPredicted RBP18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 DNAJC7Q99615 494 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 NUP85Q9BW27 656 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 LHX3Q9UBR4 397 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 MFHAS1Q9Y4C4 1052 aa18.62■□□□□ 0.57
SMARCAL1-205ENST00000425815 CHD5Q8TDI0 1954 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 NYNRINQ9P2P1 1898 aaKnown RBP18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 C16orf96A6NNT2 1141 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 PRAMEF26H0Y7S4 382 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 KRIT1O00522 736 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 INSIG1O15503 277 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 SPINT1O43278 529 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 PRAMEF11O60813 436 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 PRLRP16471 622 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 PIGHQ14442 188 aaPredicted RBP18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 SMTNL2Q2TAL5 461 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 BOLA3Q53S33 107 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 PPP6R3Q5H9R7 873 aaPredicted RBP18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 ARHGAP36Q6ZRI8 547 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 GLRX5Q86SX6 157 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 SLCO6A1Q86UG4 719 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 VSTM4Q8IW00 320 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 RYBPQ8N488 228 aaPredicted RBP18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 NIPA2Q8N8Q9 360 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 SKA1Q96BD8 255 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 KLHL32Q96NJ5 620 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 NCAPGQ9BPX3 1015 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 ETNK2Q9NVF9 386 aa18.61■□□□□ 0.57
SMARCAL1-205ENST00000425815 SPEGQ15772 3267 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 PCNX2A6NKB5 2137 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 CBFA2T2O43439 604 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 AP1G1O43747 822 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 DFNA5O60443 496 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 PCDH8O95206 1070 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 UGT2B4P06133 528 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 RARAP10276 462 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 CCT8P50990 548 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 SLC25A11Q02978 314 aaKnown RBP18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 STAT4Q14765 748 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 SUZ12Q15022 739 aaKnown RBP18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 DPYSL2Q16555 572 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 SETMARQ53H47 684 aaPredicted RBP18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 FBXL19Q6PCT2 694 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 POLNQ7Z5Q5 900 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 IQCHQ86VS3 1027 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 CPNE8Q86YQ8 564 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 OR8K1Q8NGG5 319 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 RHBDD1Q8TEB9 315 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 PACSIN1Q9BY11 444 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 ZWILCHQ9H900 591 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 ERVMER34-1Q9H9K5 563 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 FZD3Q9NPG1 666 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 TOR4AQ9NXH8 423 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 DONSONQ9NYP3 566 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 UBA2Q9UBT2 640 aaPredicted RBP18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 GGT7Q9UJ14 662 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 ANAPC7Q9UJX3 599 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 PLXNA2O75051 1894 aa18.6■□□□□ 0.57
SMARCAL1-205ENST00000425815 KNL1Q8NG31 2342 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 FLRT2O43155 660 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 DAPK3O43293 454 aa18.59■□□□□ 0.57
SMARCAL1-205ENST00000425815 TPM3P06753 285 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms