RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SMARCAD1Q9H4L7 1026 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TDRD3Q9H7E2 651 aaKnown RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PTPRHQ9HD43 1115 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PRDM8Q9NQV8 689 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SYBUQ9NX95 663 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SEPT9Q9UHD8 586 aaPredicted RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CARD8Q9Y2G2 431 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PAPSS1O43252 624 aaPredicted RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SYNCRIPO60506 623 aaKnown RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TRIM13O60858 407 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MTHFD1P11586 935 aaKnown RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PDGFRAP16234 1089 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 DCKP27707 260 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PTPN7P35236 360 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 RPL14P50914 215 aaKnown RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 GALNT2Q10471 571 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CAPRIN1Q14444 709 aaKnown RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MAMDC4Q6UXC1 1216 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CMASQ8NFW8 434 aaPredicted RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 RXFP2Q8WXD0 754 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SNX19Q92543 992 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CCDC138Q96M89 665 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 LHPPQ9H008 270 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 GTSE1Q9NYZ3 720 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.43□□□□□ -0.588e-9■■■□□ 15.4
SEC61A1-202ENST00000424880 MOSPD1Q9UJG1 213 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SLC39A10Q9ULF5 831 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TNFRSF10AO00220 468 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 EXTL3O43909 919 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 PLK1P53350 603 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 IFITM2Q01629 132 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 PPP1R8Q12972 351 aaKnown RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 OXA1LQ15070 435 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 IMPG1Q17R60 797 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 TKFCQ3LXA3 575 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 PAGE2BQ5JRK9 111 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 PPP2R2DQ66LE6 453 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 MCF2L2Q86YR7 1114 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 DLG3Q92796 817 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 RNF157Q96PX1 679 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 ADPGKQ9BRR6 497 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 TP63Q9H3D4 680 aaPredicted RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 FBRSL1Q9HCM7 1045 aaKnown RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 CYP4F12Q9HCS2 524 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 CHRAC1Q9NRG0 131 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 EXD2Q9NVH0 621 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 DNMT3BQ9UBC3 853 aaKnown RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 GIMAP2Q9UG22 337 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 CDYLQ9Y232 598 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 SIPA1L1O43166 1804 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 NOTOA8MTQ0 251 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 TNPO2O14787 897 aaKnown RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 CLPXO76031 633 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 KRT75O95678 551 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 NCK1P16333 377 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 POLR2EP19388 210 aaKnown RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 SERPINB9P50453 376 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 PRKAA2P54646 552 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 AQP6Q13520 282 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM117BQ6P1L5 589 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 TP53INP2Q8IXH6 220 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 LGI2Q8N0V4 545 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 TMEM174Q8WUU8 243 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 TRUB1Q8WWH5 349 aaKnown RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF641Q96N77 438 aaPredicted RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 FCRL3Q96P31 734 aaPredicted RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 IDI2Q9BXS1 227 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 POLR3FQ9H1D9 316 aaPredicted RBP11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 NMRAL1Q9HBL8 299 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 ERVK-11Q9UQG0 969 aa11.42□□□□□ -0.58
SEC61A1-202ENST00000424880 COL4A5P29400 1685 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 KPNA4O00629 521 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 JRKO75564 520 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 RSL1D1O76021 490 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 C2P06681 752 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 ENO2P09104 434 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 TGFBR1P36897 503 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 FKBP1AP62942 108 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 ACAP2Q15057 778 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 C6orf10Q5SRN2 563 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SLC22A16Q86VW1 577 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 XYLT1Q86Y38 959 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF420Q8TAQ5 688 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 MAELQ96JY0 434 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 CCDC17Q96LX7 622 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SEPHS2Q99611 448 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 IFT80Q9P2H3 777 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 BOLA1Q9Y3E2 137 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 MRPL42Q9Y6G3 142 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 HEATR9A2RTY3 570 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 IL7RP16871 459 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 TPH1P17752 444 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms