RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TDRD15B5MCY1 1934 aaKnown RBP12.08□□□□□ -0.48
PTPRN-204ENST00000423636 TRPM7Q96QT4 1865 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 FAM95CA0A1B0GW59 222 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 F9P00740 461 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 SERPINB9P50453 376 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 SGSHP51688 502 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 SLC18A1P54219 525 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 MS4A13Q5J8X5 152 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 DENND5AQ6IQ26 1287 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 TMEM135Q86UB9 458 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 TDRD5Q8NAT2 981 aaKnown RBP12.08□□□□□ -0.48
PTPRN-204ENST00000423636 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 SUSD3Q96L08 255 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 ZNF512Q96ME7 567 aaPredicted RBP12.08□□□□□ -0.48
PTPRN-204ENST00000423636 TRIM8Q9BZR9 551 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 SSU72Q9NP77 194 aaKnown RBP12.08□□□□□ -0.48
PTPRN-204ENST00000423636 G3V2L1 256 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 SLC8A1P32418 973 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 CCNFP41002 786 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 CDKN1CP49918 316 aaPredicted RBP12.08□□□□□ -0.48
PTPRN-204ENST00000423636 LIMK2P53671 638 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 DSC3Q14574 896 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 PLA2G4EQ3MJ16 856 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 STEAP4Q687X5 459 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 PDPK2PQ6A1A2 396 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 NUP93Q8N1F7 819 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 NTAN1Q96AB6 310 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 TBATAQ96M53 351 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 PKMYT1Q99640 499 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 OLFM1Q99784 485 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 CPNE1Q99829 537 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 WWP1Q9H0M0 922 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 RNPEPL1Q9HAU8 725 aa12.08□□□□□ -0.48
PTPRN-204ENST00000423636 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 INHAP05111 366 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SLC11A1P49279 550 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SCNN1BP51168 640 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SREBF2Q12772 1141 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 PCBP1Q15365 356 aaKnown RBP eCLIP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SPANXN3Q5MJ09 141 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 CLEC6AQ6EIG7 209 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 ITPRIPL1Q6GPH6 555 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 FRMD7Q6ZUT3 714 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SLC24A5Q71RS6 500 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 ZC3HC1Q86WB0 502 aaKnown RBP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 LGI2Q8N0V4 545 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 EFHBQ8N7U6 833 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 ANKRD49Q8WVL7 239 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 MTBPQ96DY7 904 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SEMA3CQ99985 751 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 FAM50BQ9Y247 325 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 CHD9Q3L8U1 2897 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 UBA6A0AVT1 1052 aaPredicted RBP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 KCNU1A8MYU2 1149 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SPECC1L-ADORA2AF8WAN1 911 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SNNO75324 88 aaPredicted RBP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SLC35E2BP0CK96 405 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 MUM1Q2TAK8 710 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 RIPOR1Q6ZS17 1223 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 MRPL10Q7Z7H8 261 aaKnown RBP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 COLGALT2Q8IYK4 626 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 DEFB107AQ8IZN7 70 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SLC26A7Q8TE54 656 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 UCMAQ8WVF2 138 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 MYLIPQ8WY64 445 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 TLE6Q9H808 572 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SARS2Q9NP81 518 aaKnown RBP12.07□□□□□ -0.48
PTPRN-204ENST00000423636 SAR1AQ9NR31 198 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 DCDC2Q9UHG0 476 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 LRFN2Q9ULH4 789 aa12.07□□□□□ -0.48
PTPRN-204ENST00000423636 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 TLR5O60602 858 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SERPINE1P05121 402 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SBK3P0C264 359 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GJA1P17302 382 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CCND1P24385 295 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CYP2C18P33260 490 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 OR1D2P34982 312 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 KCNC1P48547 511 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 PPP1R3AQ16821 1122 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SCIMPQ6UWF3 145 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CENPLQ8N0S6 344 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 HEXDCQ8WVB3 486 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 STMN2Q93045 179 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 PANX3Q96QZ0 392 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 FRMD8Q9BZ67 464 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GPBP1L1Q9HC44 474 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 RCOR3Q9P2K3 495 aaPredicted RBP12.06□□□□□ -0.48
PTPRN-204ENST00000423636 SLC7A8Q9UHI5 535 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 PCDHGC4Q9Y5F7 938 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 M0QZQ0 153 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 CALB2P22676 271 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 GKP32189 559 aa12.06□□□□□ -0.48
PTPRN-204ENST00000423636 RGRP47804 291 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms