RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 HEPHQ9BQS7 1158 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 CEP44Q9C0F1 390 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 SIK2Q9H0K1 926 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 TCEAL2Q9H3H9 227 aaPredicted RBP17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 APOBEC3BQ9UH17 382 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 PNMA8BQ9ULN7 279 aaPredicted RBP17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 TLN1Q9Y490 2541 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 LETM1O95202 739 aaPredicted RBP17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 ANXA6P08133 673 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 LIPCP11150 499 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 KRT85P78386 507 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 NME3Q13232 169 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 C1orf61Q13536 156 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 CARD16Q5EG05 197 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 B3GNT8Q7Z7M8 397 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 PHACTR4Q8IZ21 702 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 RAB7BQ96AH8 199 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 CENPTQ96BT3 561 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 CEP63Q96MT8 703 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 GSDMAQ96QA5 445 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 LRRC61Q9BV99 259 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 CLPBQ9H078 707 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 ARHGEF38Q9NXL2 777 aa17.04■□□□□ 0.32
CHCHD3-202ENST00000423635 TOR1BO14657 336 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 ZMPSTE24O75844 475 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 FAM87AP0C7U9 286 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 KRT5P13647 590 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 YPEL5P62699 121 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 SRSF6Q13247 344 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 PNOCQ13519 176 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 PARS2Q7L3T8 475 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 PLPP6Q8IY26 295 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 PCDH20Q8N6Y1 951 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 C1orf74Q96LT6 269 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 CPXM1Q96SM3 734 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 STRADBQ9C0K7 418 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 ANLNQ9NQW6 1124 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 DOPEY2Q9Y3R5 2298 aa17.03■□□□□ 0.32
CHCHD3-202ENST00000423635 I6L893 689 aaPredicted RBP17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 M0QYT0 321 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 THAP12O43422 761 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 GRAP2O75791 330 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ENDOD1O94919 500 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ADCY5O95622 1261 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 TSHRP16473 764 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 CCKBRP32239 447 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 NOS2P35228 1153 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 CXCR3P49682 368 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 SERPINH1P50454 418 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 THOP1P52888 689 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 TBR1Q16650 682 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 BRMS1LQ5PSV4 323 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ARTNQ5T4W7 220 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 LVRNQ6Q4G3 990 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF783Q6ZMS7 281 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ARL10Q8N8L6 244 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 SPATA20Q8TB22 786 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 PPP1R13BQ96KQ4 1090 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 GFM1Q96RP9 751 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 GTPBP4Q9BZE4 634 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 SLC13A1Q9BZW2 595 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 TKTL2Q9H0I9 626 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 WDCPQ9H6R7 721 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 EPB41L5Q9HCM4 733 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ACP6Q9NPH0 428 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 WDR70Q9NW82 654 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 SEPT10Q9P0V9 454 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 ANKMY1Q9P2S6 941 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 RABGEF1Q9UJ41 708 aa17.02■□□□□ 0.32
CHCHD3-202ENST00000423635 FLNCQ14315 2725 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 IGLV3-10A0A075B6K4 115 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 CXorf51AA0A1B0GTR3 108 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 A0A1W2PQM1 296 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 ILVBLA1L0T0 632 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 D6RAR5 112 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 GNA15P30679 374 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 OR1E1P30953 314 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 ABL2P42684 1182 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 CCNHP51946 323 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 CCDC40Q4G0X9 1142 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 ACBD5Q5T8D3 534 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 FAXCQ5TGI0 409 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 OTUD1Q5VV17 481 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 OLFML1Q6UWY5 402 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 C11orf57Q6ZUT1 292 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 JAMLQ86YT9 394 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 SDR16C5Q8N3Y7 309 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 OR7D4Q8NG98 312 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 TMEM74Q96NL1 305 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 NPY6RQ99463 290 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 SLC25A18Q9H1K4 315 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 SYNDIG1Q9H7V2 258 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 PIGVQ9NUD9 493 aa17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 GEMIN8Q9NWZ8 242 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-202ENST00000423635 RRN3Q9NYV6 651 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms