RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 SF3A2Q15428 464 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ARHGAP44Q17R89 818 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF528Q3MIS6 628 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ESCO2Q56NI9 601 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 FSCBQ5H9T9 825 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 FBXO47Q5MNV8 452 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SEL1L2Q5TEA6 688 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 KIAA0895LQ68EN5 471 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MPZL3Q6UWV2 235 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 LEKR1Q6ZMV7 388 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MARK2Q7KZI7 788 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PARGQ86W56 976 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ATPAF2Q8N5M1 289 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PJA1Q8NG27 643 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF418Q8TF45 676 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PPP1R14AQ96A00 147 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 LENG1Q96BZ8 264 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PDCD2LQ9BRP1 358 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 FAM213AQ9BRX8 229 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MRPL40Q9NQ50 206 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 CCDC177Q9NQR7 707 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TBC1D7Q9P0N9 293 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PCDHA4Q9UN74 947 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MRPL42Q9Y6G3 142 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 CYP2D7A0A087X1C5 515 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ARL5CA6NH57 179 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 XPO1O14980 1071 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TBX3O15119 743 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SPOPO43791 374 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 DIAPH2O60879 1101 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 GUCY1B2O75343 617 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 KRT14P02533 472 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ELFN1P0C7U0 828 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 FTH1P19P0C7X4 201 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 LAMP2P13473 410 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MTHFD2P13995 350 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ALOX15P16050 662 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ATP4AP20648 1035 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 HADHAP40939 763 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 RGS4P49798 205 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 CSRP3P50461 194 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NRG3P56975 720 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NCALDP61601 193 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ADAM15Q13444 863 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 EFR3AQ14156 821 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NECTIN1Q15223 517 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TAF13Q15543 124 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 CFAP157Q5JU67 520 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 WLSQ5T9L3 541 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 C6orf15Q6UXA7 325 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 C11orf96Q7Z7L8 435 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF589Q86UQ0 364 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TRAPPC5Q8IUR0 188 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MRPL43Q8N983 215 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 DNAAF3Q8N9W5 541 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 MDGA1Q8NFP4 955 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 CLP1Q92989 425 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 LPPQ93052 612 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 VPS39Q96JC1 886 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 CALR3Q96L12 384 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ART5Q96L15 291 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NUDCD1Q96RS6 583 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NTPCRQ9BSD7 190 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ALOXE3Q9BYJ1 711 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 RNPEPQ9H4A4 650 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ATP13A1Q9HD20 1204 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SARS2Q9NP81 518 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 YAE1D1Q9NRH1 226 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SDHAF3Q9NRP4 125 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 B4GALT6Q9UBX8 382 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TNPO3Q9Y5L0 923 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 APCP25054 2843 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ALPK2Q86TB3 2170 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 A0A1W2PQD8 194 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 KRT87PA6NCN2 255 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SMAD7O15105 426 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 NVLO15381 856 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PSMD3O43242 534 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 RPN1P04843 607 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 GSTT2P0CG29 244 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 GSTT2BP0CG30 244 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TYRP14679 529 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ATP5JP18859 108 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ACO1P21399 889 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 RELBQ01201 579 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF658Q5TYW1 1059 aaPredicted RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 RBM43Q6ZSC3 357 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 SLC34A3Q8N130 599 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 GPD1LQ8N335 351 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 PPM1KQ8N3J5 372 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 OR2T3Q8NH03 318 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 FNIP1Q8TF40 1166 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM171Q8WVE6 324 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.6□□□□□ -1.831e-13■■■□□ 16.1
TOP2A-201ENST00000423485 TOE1Q96GM8 510 aaKnown RBP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 AGPAT1Q99943 283 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.6□□□□□ -1.83
TOP2A-201ENST00000423485 KDM4CQ9H3R0 1056 aa3.6□□□□□ -1.83
TOP2A-201ENST00000423485 QPCTLQ9NXS2 382 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms