RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 EXOC2Q96KP1 924 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF599Q96NL3 588 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 OLFM3Q96PB7 478 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 FAM118BQ9BPY3 351 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 CINPQ9BW66 212 aaPredicted RBP9.42□□□□□ -0.9
PDGFC-202ENST00000422544 CARD9Q9H257 536 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 FBRSQ9HAH7 460 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 LHX3Q9UBR4 397 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 SEPT3Q9UH03 358 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 SARDHQ9UL12 918 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 PPM1HQ9ULR3 514 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 NUP205Q92621 2012 aa9.42□□□□□ -0.9
PDGFC-202ENST00000422544 AKAP13Q12802 2813 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CCDC163A0A0D9SF12 145 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 TTC24A2A3L6 582 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 APOC4-APOC2K7ER74 178 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 KCNK1O00180 336 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 KRIT1O00522 736 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 PPP1R12AO14974 1030 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 MID1O15344 667 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 INSIG1O15503 277 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 HRO43593 1189 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CEP104O60308 925 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 GJB3O75712 270 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 POP4O95707 220 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 GSRP00390 522 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 JCHAINP01591 159 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 APOC2P02655 101 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CTSLP07711 333 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ACADMP11310 421 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CCNB1P14635 433 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 SLC8A1P32418 973 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 MMP13P45452 471 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 RGRP47804 291 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 PSMD8P48556 350 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 RENBPP51606 427 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CCNHP51946 323 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 METAP1P53582 386 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 MAXP61244 160 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 OTUD4Q01804 1114 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 PPIDQ08752 370 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 SRSF5Q13243 272 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 KLF1Q13351 362 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 HNRNPDQ14103 355 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF235Q14590 738 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 NOMO1Q15155 1222 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CST6Q15828 149 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 HS1BP3Q53T59 392 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 TIGD7Q6NT04 549 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ADAT2Q7Z6V5 191 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 DSG4Q86SJ6 1040 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 WDR5BQ86VZ2 330 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 SLC13A5Q86YT5 568 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 PGBD5Q8N414 524 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 TEX26Q8N6G2 289 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 FRMD1Q8N878 549 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 PIP4K2CQ8TBX8 421 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ACTL9Q8TC94 416 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 GRIN3AQ8TCU5 1115 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 TFB1MQ8WVM0 346 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 MAML1Q92585 1016 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 NELL1Q92832 810 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF419Q96HQ0 510 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CCDC114Q96M63 670 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 GDAP1L1Q96MZ0 367 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 PSKH2Q96QS6 385 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 WDR24Q96S15 920 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 HEPHQ9BQS7 1158 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 FAM126AQ9BYI3 521 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 BRD8Q9H0E9 1235 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 C10orf88Q9H8K7 445 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 CD93Q9NPY3 652 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ITM2CQ9NQX7 267 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 RBM22Q9NW64 420 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 ZSCAN32Q9NX65 697 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 SEPT10Q9P0V9 454 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 IL36AQ9UHA7 158 aa9.41□□□□□ -0.9
PDGFC-202ENST00000422544 EVLQ9UI08 416 aaPredicted RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 R3HDM2Q9Y2K5 976 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 DSPP15924 2871 aaKnown RBP9.41□□□□□ -0.9
PDGFC-202ENST00000422544 FAM208BQ5VWN6 2430 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 H7C0C1 242 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 PLK4O00444 970 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ALOX15BO15296 676 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 LEFTY1O75610 366 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 NEBLO76041 1014 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 IGSF6O95976 241 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 DNTTP04053 509 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 C7P10643 843 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 C5AR1P21730 350 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ATP5OP48047 213 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 SCNN1BP51168 640 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 TPMTP51580 245 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 EIF3EP60228 445 aaKnown RBP9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ZBTB16Q05516 673 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ZNF33AQ06730 810 aa9.4□□□□□ -0.9
PDGFC-202ENST00000422544 ITKQ08881 620 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms