RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TPCN1Q9ULQ1 816 aa5.29□□□□□ -1.56
SFXN1-202ENST00000421887 ATP8A1Q9Y2Q0 1164 aa5.29□□□□□ -1.56
SFXN1-202ENST00000421887 INSL5Q9Y5Q6 135 aa5.29□□□□□ -1.56
SFXN1-202ENST00000421887 LAMA1P25391 3075 aa5.29□□□□□ -1.56
SFXN1-202ENST00000421887 SMG1Q96Q15 3661 aaKnown RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TSC2P49815 1807 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ARID2Q68CP9 1835 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 IGLV3-22A0A075B6J6 115 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 IGKV6-21A0A0C4DH24 114 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 hCG_1984214I3L0E3 225 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ASAP2O43150 1006 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 RRP8O43159 456 aaKnown RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 PEX1O43933 1283 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 B3GAT3O94766 335 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 PLEKHA8P1O95397 391 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 GPANK1O95872 356 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ASLP04424 464 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 PRKCBP05771 671 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 THP07101 528 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 DRD1P21728 446 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 CCR2P41597 374 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 PDE1AP54750 535 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 FAM193AP78312 1265 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 HSD11B2P80365 405 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ROR1Q01973 937 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TWF1Q12792 350 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 BYSLQ13895 437 aaKnown RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TFDP1Q14186 410 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 DMC1Q14565 340 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 DUOXA1Q1HG43 343 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ARHGAP15Q53QZ3 475 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TMEM196Q5HYL7 178 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TSTD2Q5T7W7 516 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ANKRD45Q5TZF3 282 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 JAKMIP3Q5VZ66 844 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 CREB3L3Q68CJ9 461 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 C11orf87Q6NUJ2 197 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 SLC27A1Q6PCB7 646 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 MIER3Q7Z3K6 550 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ARID3BQ8IVW6 561 aaPredicted RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TCEAL8Q8IYN2 117 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 GALNT15Q8N3T1 639 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 MINDY1Q8N5J2 469 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 RPLP0P6Q8NHW5 317 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 CEP76Q8TAP6 659 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 BPIFB1Q8TDL5 484 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TCP11Q8WWU5 503 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 PRPF31Q8WWY3 499 aaKnown RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 NACC2Q96BF6 587 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 SARAFQ96BY9 339 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 FUBP3Q96I24 572 aaKnown RBP eCLIP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 CPB2Q96IY4 423 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 PAAF1Q9BRP4 392 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TEKT3Q9BXF9 490 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 MINDY3Q9H8M7 445 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ITPR1Q14643 2758 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 GOLGA4Q13439 2230 aaKnown RBP5.28□□□□□ -1.56
SFXN1-202ENST00000421887 MYO16Q9Y6X6 1858 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 ZMYM2Q9UBW7 1377 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 APC2O95996 2303 aa5.28□□□□□ -1.56
SFXN1-202ENST00000421887 TNRC6BQ9UPQ9 1833 aaKnown RBP5.27□□□□□ -1.57
SFXN1-202ENST00000421887 GON4LQ3T8J9 2241 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TMEM150BA6NC51 233 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TRABD2BA6NFA1 517 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 H7C4K7 107 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TRDMT1O14717 391 aaKnown RBP5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TSPAN1O60635 241 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 DKC1O60832 514 aaKnown RBP eCLIP5.27□□□□□ -1.57
SFXN1-202ENST00000421887 RFPL3O75679 317 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 EGFP01133 1207 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 CYP3A4P08684 503 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 RXRAP19793 462 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 CCKBRP32239 447 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 HOXD12P35452 270 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 CDKN1CP49918 316 aaPredicted RBP5.27□□□□□ -1.57
SFXN1-202ENST00000421887 LAMTOR4Q0VGL1 99 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 SLC14A1Q13336 389 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 PLD1Q13393 1074 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 MXD4Q14582 209 aaPredicted RBP5.27□□□□□ -1.57
SFXN1-202ENST00000421887 UGCGQ16739 394 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 LYSMD4Q5XG99 296 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TPGS2Q68CL5 300 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 ZNF626Q68DY1 528 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 ANO7Q6IWH7 933 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 SLC8B1Q6J4K2 584 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 SYNE3Q6ZMZ3 975 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TOGARAM2Q6ZUX3 1019 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 THNSL2Q86YJ6 484 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 RDM1Q8NG50 284 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 SNX33Q8WV41 574 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TMEM143Q96AN5 459 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 CEP170P1Q96L14 293 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 ZNF48Q96MX3 618 aaPredicted RBP5.27□□□□□ -1.57
SFXN1-202ENST00000421887 RIT2Q99578 217 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 TIMP4Q99727 224 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 P2RY13Q9BPV8 354 aa5.27□□□□□ -1.57
SFXN1-202ENST00000421887 WACQ9BTA9 647 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms