RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 LRRC55Q6ZSA7 311 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SPATA6LQ8N4H0 392 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 MCOLN3Q8TDD5 553 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 RAB26Q9ULW5 256 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SETBP1Q9Y6X0 1596 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 KLRC4O43908 158 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 GUCY1B2O75343 617 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 AVILO75366 819 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 TM7SF2O76062 418 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CYP2B6P20813 491 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CCR3P51677 355 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SLC7A2P52569 658 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CRTC3Q6UUV7 619 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 COMMD2Q86X83 199 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 PALB2Q86YC2 1186 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 YME1L1Q96TA2 773 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 PDCD10Q9BUL8 212 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 GMEB1Q9Y692 573 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 DCDC2CA8MYV0 355 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 HNRNPLP14866 589 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 RXRBP28702 533 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SEPHS1P49903 392 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ACSM2AQ08AH3 577 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ACSM2BQ68CK6 577 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ARMC8Q8IUR7 673 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 EEF1AKMT1Q8WVE0 214 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CIB1Q99828 191 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 DENND2DQ9H6A0 471 aaPredicted RBP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ATP6AP2A0A1C7CYW4 349 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ATP6AP2O75787 350 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 THP07101 528 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 TYMPP19971 482 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 CPT1AP50416 773 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 C16orf62Q7Z3J2 963 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SLC47A1Q96FL8 570 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ZBTB45Q96K62 511 aaPredicted RBP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 TNPO3Q9Y5L0 923 aaKnown RBP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 EML1O00423 815 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ALOX15BO15296 676 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 FADS2O95864 444 aaKnown RBP12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ADAM17P78536 824 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SCIMPQ6UWF3 145 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 LZTR1Q8N653 840 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SPATA20Q8TB22 786 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 BBS4Q96RK4 519 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 ADI1Q9BV57 179 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 SSR3Q9UNL2 185 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 FADS3Q9Y5Q0 445 aa12.47□□□□□ -0.41
CLCN4-203ENST00000421085 H3BMM5 538 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TRUB2O95900 331 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SERPINA1P01009 418 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TGM3Q08188 693 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 LRRC38Q5VT99 294 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 ANGEL2Q5VTE6 544 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 FAM131AQ6UXB0 335 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SATL1Q86VE3 508 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 LRRN4Q8WUT4 740 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 USP7Q93009 1102 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SYT15Q9BQS2 421 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SAMHD1Q9Y3Z3 626 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 LINC00032P0C843 101 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TFEBP19484 476 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 HOXD10P28358 340 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 RAB10P61026 200 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 INTS11Q5TA45 600 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 ZC3H7AQ8IWR0 971 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 LINC00116Q8NCU8 138 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SLC2A14Q8TDB8 520 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 AP3S1Q92572 193 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 REPS1Q96D71 796 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 EBNA1BP2Q99848 306 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 MRPL57Q9BQC6 102 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 RTFDC1Q9BY42 306 aaPredicted RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TKTL2Q9H0I9 626 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 CCNB1IP1Q9NPC3 277 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 SNX15Q9NRS6 342 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 ARL15Q9NXU5 204 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 FSCN2O14926 492 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 HOXB8P17481 243 aaPredicted RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 PIK3CGP48736 1102 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 CDK9P50750 372 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 TBX4P57082 545 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 NFIAQ12857 509 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 ITGA7Q13683 1181 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 ZFP14Q9HCL3 533 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 ERVK-5Q9HDB9 667 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 CASTOR2A6NHX0 329 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
CLCN4-203ENST00000421085 LRG1P02750 347 aa12.46□□□□□ -0.41
CLCN4-203ENST00000421085 CAP2P40123 477 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms