RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 IGSF6O95976 241 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 MMP2P08253 660 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 HLA-EP13747 358 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 TARSP26639 723 aaKnown RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 PSMB4P28070 264 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 ADCY8P40145 1251 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 FZD5Q13467 585 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 IHHQ14623 411 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 C2orf27AQ580R0 203 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 RALGPS1Q5JS13 557 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 ATXN7L2Q5T6C5 722 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 FAXCQ5TGI0 409 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 DUPD1Q68J44 220 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 CCDC70Q6NSX1 233 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 NCEH1Q6PIU2 408 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 PRPF39Q86UA1 669 aaKnown RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 KLHDC8BQ8IXV7 354 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 SIX5Q8N196 739 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 ZNF366Q8N895 744 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 OR2AP1Q8NGE2 309 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 LRRC45Q96CN5 670 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 IMP4Q96G21 291 aaKnown RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 EXOC2Q96KP1 924 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 NELL2Q99435 816 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 GORASP1Q9BQQ3 440 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 RHOXF2Q9BQY4 288 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 TM6SF2Q9BZW4 377 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 LTB4R2Q9NPC1 389 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 CACNA2D2Q9NY47 1150 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 MRPS17Q9Y2R5 130 aaKnown RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 SNX24Q9Y343 169 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 UTP11Q9Y3A2 253 aaKnown RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 MTF2Q9Y483 593 aaPredicted RBP12.66□□□□□ -0.38
TMEM53-206ENST00000420706 TTLL3Q9Y4R7 772 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 STON1Q9Y6Q2 735 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
TMEM53-206ENST00000420706 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 DNALI1O14645 258 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 BNIP3LO60238 219 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 RNF40O75150 1001 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 POP4O95707 220 aaKnown RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 MT-CYBP00156 380 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 PRKCHP24723 683 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 NTSR1P30989 418 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 CD86P42081 329 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 WASP42768 502 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 DRG2P55039 364 aaKnown RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 SKOR1P84550 965 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 SEMA5AQ13591 1074 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 PRPSAP1Q14558 356 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 TRADDQ15628 312 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 C9orf64Q5T6V5 341 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 SERPINA13PQ6UXR4 307 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 DPY19L3Q6ZPD9 716 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 Q6ZVU0 165 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 CHPFQ8IZ52 775 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 CHST14Q8NCH0 376 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 OR2A12Q8NGT7 310 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 SPATA22Q8NHS9 363 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 SEC14L1Q92503 715 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 VOPP1Q96AW1 172 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 TADA1Q96BN2 335 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 OXNAD1Q96HP4 312 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 GDAP1L1Q96MZ0 367 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 RBM15Q96T37 977 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 MLPHQ9BV36 600 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 DPH5Q9H2P9 285 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 UBP1Q9NZI7 540 aa12.65□□□□□ -0.38
TMEM53-206ENST00000420706 HECAQ9UBI9 543 aaPredicted RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 TPX2Q9ULW0 747 aaKnown RBP12.65□□□□□ -0.38
TMEM53-206ENST00000420706 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.39
TMEM53-206ENST00000420706 F5P12259 2224 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 FAM170BA6NMN3 283 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 PSMD3O43242 534 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 SIN3BO75182 1162 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 ANXA9O76027 345 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 KLF8O95600 359 aaPredicted RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 EPHX1P07099 455 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 SERPINF2P08697 491 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 ITIH2P19823 946 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 GKP32189 559 aa12.64□□□□□ -0.39
TMEM53-206ENST00000420706 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 CCNHP51946 323 aaPredicted RBP12.64□□□□□ -0.39
TMEM53-206ENST00000420706 TERF1P54274 439 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms