RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 PLPP6Q8IY26 295 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 RYBPQ8N488 228 aaPredicted RBP17.59■□□□□ 0.41
PTCD1-202ENST00000419981 DCBLD1Q8N8Z6 715 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 JOSD2Q8TAC2 188 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 ARHGEF2Q92974 986 aaKnown RBP17.59■□□□□ 0.41
PTCD1-202ENST00000419981 TBC1D31Q96DN5 1066 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 CRELD1Q96HD1 420 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 BMFQ96LC9 184 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 MAGEH1Q9H213 219 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 GPR27Q9NS67 375 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 TMEM248Q9NWD8 314 aa17.59■□□□□ 0.41
PTCD1-202ENST00000419981 POM121BA6NF01 834 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 H3BM21 787 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 LRIG2O94898 1065 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 GJB6O95452 261 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 GIMD1P0DJR0 217 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 CKMT1AP12532 417 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 CHRNB2P17787 502 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 EIF2S3P41091 472 aaKnown RBP17.58■□□□□ 0.4
PTCD1-202ENST00000419981 HNRNPKP61978 463 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTCD1-202ENST00000419981 SNRPD1P62314 119 aaKnown RBP17.58■□□□□ 0.4
PTCD1-202ENST00000419981 CDKAL1Q5VV42 579 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 KDM7AQ6ZMT4 941 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 CCDC185Q8N715 623 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 OR2AP1Q8NGE2 309 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 OR6K2Q8NGY2 324 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 FAM172AQ8WUF8 416 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 RAB7BQ96AH8 199 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 DUSP23Q9BVJ7 150 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 CAAP1Q9H8G2 361 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 EVA1BQ9NVM1 165 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 NEU3Q9UQ49 428 aa17.58■□□□□ 0.4
PTCD1-202ENST00000419981 C16orf96A6NNT2 1141 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 FAM72CH0Y354 149 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 NEMP1O14524 444 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 FPGTO14772 594 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 EPHB6O15197 1021 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 RAD51BO15315 384 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 RRP8O43159 456 aaKnown RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 TSPAN6O43657 245 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 BRINP1O60477 761 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 RAMP2O60895 175 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 GSRP00390 522 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 MT-CO3P00414 261 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 PLEKP08567 350 aaPredicted RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 KRT3P12035 628 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 UNGP13051 313 aaPredicted RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 GKP32189 559 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 STAT1P42224 750 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 ABL2P42684 1182 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 NSFP46459 744 aaKnown RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 RABIFP47224 123 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 HDAC4P56524 1084 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 GSCP56915 257 aaPredicted RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 SGCGQ13326 291 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 ZNF805Q5CZA5 627 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 ZNF542PQ5EBM4 170 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 FAM72AQ5TYM5 149 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 FAM72DQ6L9T8 149 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 PARGQ86W56 976 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 FAM72BQ86X60 149 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 SNIP1Q8TAD8 396 aaKnown RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 BAP1Q92560 729 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 CENPIQ92674 756 aaPredicted RBP17.57■□□□□ 0.4
PTCD1-202ENST00000419981 APOLD1Q96LR9 279 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 SELENOOQ9BVL4 669 aa17.57■□□□□ 0.4
PTCD1-202ENST00000419981 SPTY2D1-AS1A0A0U1RR47 76 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 IGLON5A6NGN9 336 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 KRIT1O00522 736 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 SCAMP1O15126 338 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 GPD1P21695 349 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ITPKBP27987 946 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 DUSP3P51452 185 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-202ENST00000419981 PTP4A2Q12974 167 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 PDE1CQ14123 709 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-202ENST00000419981 FZD2Q14332 565 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ZNF354CQ86Y25 554 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 FAM181AQ8N9Y4 354 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 DENND6BQ8NEG7 585 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ZNF548Q8NEK5 533 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-202ENST00000419981 NTAN1Q96AB6 310 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ARHGEF26Q96DR7 871 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 BBC3Q96PG8 261 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-202ENST00000419981 LENG8Q96PV6 779 aaPredicted RBP17.56■□□□□ 0.4
PTCD1-202ENST00000419981 C1QTNF2Q9BXJ5 285 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 OSBPL1AQ9BXW6 950 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 MAGEB5Q9BZ81 275 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 USP29Q9HBJ7 922 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ADAM22Q9P0K1 906 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 IPO11Q9UI26 975 aaKnown RBP17.56■□□□□ 0.4
PTCD1-202ENST00000419981 GGT7Q9UJ14 662 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ITM2BQ9Y287 266 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 PTPRQQ9UMZ3 2332 aa17.56■□□□□ 0.4
PTCD1-202ENST00000419981 ZSCAN5CA6NGD5 496 aaPredicted RBP17.55■□□□□ 0.4
PTCD1-202ENST00000419981 EIF4E1BA6NMX2 242 aaKnown RBP17.55■□□□□ 0.4
PTCD1-202ENST00000419981 K7ESM1 405 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 KDELR3O43731 214 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 OPA1O60313 960 aa17.55■□□□□ 0.4
PTCD1-202ENST00000419981 NEBLO76041 1014 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms