RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TOGARAM2Q6ZUX3 1019 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 BEND5Q7L4P6 421 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 APTXQ7Z2E3 356 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TAC4Q86UU9 113 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 WDR5BQ86VZ2 330 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 CPNE8Q86YQ8 564 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 CPXM2Q8N436 756 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 CCDC33Q8N5R6 958 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 ALLCQ8N6M5 410 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 AOPEPQ8N6M6 819 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 IL17RCQ8NAC3 791 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TXNDC5Q8NBS9 432 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TMEM52Q8NDY8 209 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 PIWIL1Q96J94 861 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 PPP1R13BQ96KQ4 1090 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 FCRL2Q96LA5 508 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 SERPINB11Q96P15 392 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 NOX5Q96PH1 765 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TRIM62Q9BVG3 475 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 STK33Q9BYT3 514 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 NAT10Q9H0A0 1025 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 LHX5Q9H2C1 402 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 ZDHHC4Q9NPG8 344 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 PLCB1Q9NQ66 1216 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 FAM207AQ9NSI2 230 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 SLAMF8Q9P0V8 285 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 MMP17Q9ULZ9 603 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 NAALADL1Q9UQQ1 740 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 SIK3Q9Y2K2 1263 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 LAMA1P25391 3075 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 PRRT4C9JH25 899 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SGK1O00141 431 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 ADAM23O75077 832 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 IGLV3-25P01717 112 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 ERBB2P04626 1255 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CYBBP04839 570 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CISD3P0C7P0 127 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 ATP1A3P13637 1013 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 HNRNPLP14866 589 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CYP11B1P15538 503 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CDH5P33151 784 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CNR2P34972 360 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 TBX4P57082 545 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 JAM2P57087 298 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 BPIFB4P59827 614 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 POLR2FP61218 127 aaKnown RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 YWHAZP63104 245 aaKnown RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 LAPTM5Q13571 262 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SIM2Q14190 667 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SYCP1Q15431 976 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 TESK1Q15569 626 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CRY1Q16526 586 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 KLHL40Q2TBA0 621 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 HSF5Q4G112 596 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 PTPN20Q4JDL3 420 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 EOGTQ5NDL2 527 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SYPL2Q5VXT5 272 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 E4F1Q66K89 784 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 NUGGCQ68CJ6 796 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 MBLAC2Q68D91 279 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 ANO7Q6IWH7 933 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 OLFML1Q6UWY5 402 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 PRR23BQ6ZRT6 265 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 FAM183BPQ6ZVS7 135 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 RASSF3Q86WH2 238 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CAMKK1Q8N5S9 505 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 TSTD1Q8NFU3 115 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 IPO4Q8TEX9 1081 aaKnown RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 DDI1Q8WTU0 396 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 DDX1Q92499 740 aaKnown RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 RUBCNQ92622 972 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 DIO2Q92813 273 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 MFSD3Q96ES6 412 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SLC2A13Q96QE2 648 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 BPIFA3Q9BQP9 254 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 FUCA2Q9BTY2 467 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 G6PC3Q9BUM1 346 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SYNCQ9H7C4 482 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 POPDC2Q9HBU9 364 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 TRIM39Q9HCM9 518 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 PRDM7Q9NQW5 492 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 ASNSD1Q9NWL6 643 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 NCDNQ9UBB6 729 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 EBF1Q9UH73 591 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 NOCTQ9UK39 431 aaKnown RBP7.17□□□□□ -1.26
HMGN1-205ENST00000419378 FBXO10Q9UK96 956 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SLC27A6Q9Y2P4 619 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 CEP83Q9Y592 693 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 NPFFR2Q9Y5X5 522 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 EML5Q05BV3 1969 aa7.17□□□□□ -1.26
HMGN1-205ENST00000419378 SPTBN4Q9H254 2564 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 CEP250Q9BV73 2442 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 TRBV23OR9-2A0A075B6M9 112 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 GOLGA6L7A0A1B0GV03 622 aa7.16□□□□□ -1.26
HMGN1-205ENST00000419378 KIAA1324LA8MWY0 1029 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-205ENST00000419378 CAPN9O14815 690 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms