RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CNOT9Q92600 299 aaKnown RBP4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 TRIM63Q969Q1 353 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 LYZL4Q96KX0 146 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 EYA3Q99504 573 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 HIPK2Q9H2X6 1198 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 CATSPERBQ9H7T0 1116 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 CNPY2Q9Y2B0 182 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 NCAM2O15394 837 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 TSPAN3O60637 253 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 ENO3P13929 434 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 ITGB8P26012 769 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 TNFRSF8P28908 595 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 CCKARP32238 428 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 CENPAP49450 140 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 PCYT1AP49585 367 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 ENTPD1P49961 510 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 EFNA5P52803 228 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 CAPSQ13938 189 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 TMEM95Q3KNT9 176 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 DNTTIP2Q5QJE6 756 aaKnown RBP4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 SMC5Q8IY18 1101 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 FBXL14Q8N1E6 418 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 PLD5Q8N7P1 536 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 RFWD2Q8NHY2 731 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 GDPD5Q8WTR4 605 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 NEUROG1Q92886 237 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 MAELQ96JY0 434 aaKnown RBP4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 SF3B5Q9BWJ5 86 aaKnown RBP4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 PLK2Q9NYY3 685 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 FZD10Q9ULW2 581 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 MYO6Q9UM54 1294 aa4.7□□□□□ -1.66
HMGB1P49-201ENST00000418882 RRN3P2A6NIE6 340 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 OR6C75A6NL08 312 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 EIF3JO75822 258 aaKnown RBP4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 ACAA1P09110 424 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 PDLIM4P50479 330 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 TRAF3Q13114 568 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 BIRC3Q13489 604 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 CTTNQ14247 550 aaKnown RBP4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 SHBQ15464 509 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 TAF12Q16514 161 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 OTUD1Q5VV17 481 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 RETSATQ6NUM9 610 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 PRSS45Q7RTY3 260 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 CHD1LQ86WJ1 897 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 TMC8Q8IU68 726 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 TMTC1Q8IUR5 882 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 MIGA1Q8NAN2 632 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 MCPH1Q8NEM0 835 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 TMEM163Q8TC26 289 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZBTB10Q96DT7 871 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 YME1L1Q96TA2 773 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZPBPQ9BS86 351 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 GPR63Q9BZJ6 419 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 CLK4Q9HAZ1 481 aaKnown RBP4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 ENTPD7Q9NQZ7 604 aa4.69□□□□□ -1.66
HMGB1P49-201ENST00000418882 A0A096LPK6 155 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 C17orf113A0A1B0GUU1 675 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 PROB1E7EW31 1015 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 J3KR12 359 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 SLC28A2O43868 658 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 URODP06132 367 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 PYGLP06737 847 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 MMP3P08254 477 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 MAPK9P45984 424 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 CCT5P48643 541 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 PPM1FP49593 454 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 CRYZQ08257 329 aaKnown RBP4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 FAM27E3Q08E93 113 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 TBL3Q12788 808 aaKnown RBP4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 LPIN1Q14693 890 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 FSCBQ5H9T9 825 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 ADGRG6Q86SQ4 1221 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 EXOC8Q8IYI6 725 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 CPXCR1Q8N123 301 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 CPXM2Q8N436 756 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 ADAMTS15Q8TE58 950 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 TMEM170AQ8WVE7 144 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 PSMD1Q99460 953 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 ALKBH4Q9NXW9 302 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZNF580Q9UK33 172 aa4.68□□□□□ -1.66
HMGB1P49-201ENST00000418882 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 TIMM23O14925 209 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 HNRNPA1P09651 372 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 CDC25AP30304 524 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 HOXD3P31249 432 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 RYKP34925 604 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 MLH1P40692 756 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 GPR12P47775 334 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 CLCN5P51795 746 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 CLDN2P57739 230 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 BNC1Q01954 994 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 LTBQ06643 244 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZNF585BQ52M93 769 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 RUSC1-AS1Q66K80 236 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 IL20RBQ6UXL0 311 aa4.67□□□□□ -1.66
HMGB1P49-201ENST00000418882 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms