RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PSMD8P48556 350 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 DHPSP49366 369 aaPredicted RBP10.69□□□□□ -0.7
RFC1-203ENST00000418436 METAP1P53582 386 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 ZNF33AQ06730 810 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 IL10RBQ08334 325 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 PAFAH1B3Q15102 231 aaKnown RBP10.69□□□□□ -0.7
RFC1-203ENST00000418436 CYTH1Q15438 398 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 CSRP2Q16527 193 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 ANKRD20A8PQ5CZ79 823 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 FAM46CQ5VWP2 391 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 PEAR1Q5VY43 1037 aaPredicted RBP10.69□□□□□ -0.7
RFC1-203ENST00000418436 C11orf63Q6NUN7 778 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 LEKR1Q6ZMV7 388 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 ZNF354CQ86Y25 554 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 MAP7D3Q8IWC1 876 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 TP53INP2Q8IXH6 220 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 RHOT1Q8IXI2 618 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 GPR161Q8N6U8 529 aaKnown RBP10.69□□□□□ -0.7
RFC1-203ENST00000418436 NETO2Q8NC67 525 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 OR2AP1Q8NGE2 309 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 TPCN2Q8NHX9 752 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 PIP4K2CQ8TBX8 421 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 FOXJ1Q92949 421 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 GPR174Q9BXC1 333 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 CALN1Q9BXU9 219 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 BTBD1Q9H0C5 482 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 NEUROG2Q9H2A3 272 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 PARD6AQ9NPB6 346 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 KLHL11Q9NVR0 708 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 IL36AQ9UHA7 158 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 NCKAP1Q9Y2A7 1128 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 HYOU1Q9Y4L1 999 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 WASF2Q9Y6W5 498 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 DUSP10Q9Y6W6 482 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 FAM186AA6NE01 2351 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 WDR87Q6ZQQ6 2873 aa10.69□□□□□ -0.7
RFC1-203ENST00000418436 RIF1Q5UIP0 2472 aaKnown RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 GOLGA6L3A6NEY3 463 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 METTL12A8MUP2 240 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 C1QTNF3-AMACRE9PGA6 284 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 DFFAO00273 331 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 SLC7A4O43246 635 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 SIAH2O43255 324 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 PSTPIP1O43586 416 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 BNIP3LO60238 219 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 RNASEH2AO75792 299 aaKnown RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 SEMA4FO95754 770 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 PEX11BO96011 259 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 PRNPP04156 253 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 ZNF806P0C7X5 589 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 SERPINB6P35237 376 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 MPLP40238 635 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 DPP6P42658 865 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 SNRPD1P62314 119 aaKnown RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 CREB5Q02930 508 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 SPEM2Q0P670 501 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 RFTN1Q14699 578 aaPredicted RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 TAZQ16635 292 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 LINC01559Q495D7 138 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 LYSMD4Q5XG99 296 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 NCBP2-AS2Q69YL0 99 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 ARHGAP36Q6ZRI8 547 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 FAM124AQ86V42 546 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 SYT12Q8IV01 421 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 HDDC3Q8N4P3 179 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 DEFB119Q8N690 84 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 PQLC3Q8N755 202 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 ZNF511Q8NB15 262 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 DNASE2BQ8WZ79 361 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 LRIG1Q96JA1 1093 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 HSPA12BQ96MM6 686 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 ZNF599Q96NL3 588 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 RNF157Q96PX1 679 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 OMDQ99983 421 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 HEPHQ9BQS7 1158 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 DESI2Q9BSY9 194 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 GOLPH3Q9H4A6 298 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 VPS45Q9NRW7 570 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 SEMA4GQ9NTN9 838 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 TMEM74BQ9NUR3 256 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 DDX56Q9NY93 547 aaKnown RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 HECAQ9UBI9 543 aaPredicted RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 LHX3Q9UBR4 397 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 UBA2Q9UBT2 640 aaPredicted RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 IPO11Q9UI26 975 aaKnown RBP10.68□□□□□ -0.7
RFC1-203ENST00000418436 PILRBQ9UKJ0 227 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 ANKRD36A6QL64 1941 aa10.68□□□□□ -0.7
RFC1-203ENST00000418436 PI4KAP42356 2102 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 EP300Q09472 2414 aaPredicted RBP10.67□□□□□ -0.7
RFC1-203ENST00000418436 LRRD1A4D1F6 860 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 ARHGAP6O43182 974 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 SPOPO43791 374 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 MAFKO60675 156 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 LEFTY1O75610 366 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 POP4O95707 220 aaKnown RBP10.67□□□□□ -0.7
RFC1-203ENST00000418436 ITPKAP23677 461 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 HOXD12P35452 270 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 CSNK1DP48730 415 aa10.67□□□□□ -0.7
RFC1-203ENST00000418436 DNA2P51530 1060 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms