RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 TADA2AO75478 443 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 NPR3P17342 541 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 RAP1GDS1P52306 607 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SEMG2Q02383 582 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 ARHGAP1Q07960 439 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 DPYSL2Q16555 572 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 LDLRAP1Q5SW96 308 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SAPCD2Q86UD0 394 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 PDSS2Q86YH6 399 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 CDC26Q8NHZ8 85 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 LPGAT1Q92604 370 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 PCED1BQ96HM7 432 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 LRCH3Q96II8 777 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 CPNE1Q99829 537 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 MRPL46Q9H2W6 279 aaKnown RBP13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SSU72Q9NP77 194 aaKnown RBP13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 NCKIPSDQ9NZQ3 722 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 ACTL7AQ9Y615 435 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 MCM3APO60318 1980 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SNNO75324 88 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 RNASEH2AO75792 299 aaKnown RBP13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 LINC00032P0C843 101 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 CCR1P32246 355 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 SPPL2CQ8IUH8 684 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 CCDC90BQ9GZT6 254 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 NACA2Q9H009 215 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 Q9H521 79 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 PFDN4Q9NQP4 134 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
TNFRSF8-203ENST00000417814 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 I6L893 689 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 INPP4BO15327 924 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 DDHD2O94830 711 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 CPB1P15086 417 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 HOXA11P31270 313 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 PSME3P61289 254 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 NRG1Q02297 640 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 BTBD8Q5XKL5 378 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 PLPPR4Q7Z2D5 763 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 CLVS1Q8IUQ0 354 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 FRMD8P1Q9BZ68 369 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 FAM96AQ9H5X1 160 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 TMEM30AQ9NV96 361 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 RGSL1A5PLK6 1076 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 H3BMM5 538 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 MTHFD1P11586 935 aaKnown RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 PSMD7P51665 324 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 ZNF280AP59817 542 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 GRTP1Q5TC63 336 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 ARCQ7LC44 396 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 CFAP52Q8N1V2 620 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 MTMR14Q8NCE2 650 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 VPS33AQ96AX1 596 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 ZBED3Q96IU2 234 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 MLPHQ9BV36 600 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 ZNF180Q9UJW8 692 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 COPG1Q9Y678 874 aaKnown RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 CCL15-CCL14A0A0B4J2E2 113 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 PDHXO00330 501 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 UBDO15205 165 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 KATNA1O75449 491 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 CD86P42081 329 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 STX1BP61266 288 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 C16orf72Q14CZ0 275 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 CCL15Q16663 113 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 DDR2Q16832 855 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 SLC26A9Q7LBE3 791 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 LILRA2Q8N149 483 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 TRPC4APQ8TEL6 797 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 SENP6Q9GZR1 1112 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 ARMC7Q9H6L4 198 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 BPIFA1Q9NP55 256 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 SIPA1L1O43166 1804 aa13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF8-203ENST00000417814 GIPC1O14908 333 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 ZBTB11O95625 1053 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 PGK1P00558 417 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 DPP6P42658 865 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 GSSP48637 474 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 PTPRRQ15256 657 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 CLEC20AQ6ZU45 233 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 HSPBAP1Q96EW2 488 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 VPS50Q96JG6 964 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 KLHL32Q96NJ5 620 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 COLEC11Q9BWP8 271 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 ADNPQ9H2P0 1102 aa13.34□□□□□ -0.27
TNFRSF8-203ENST00000417814 TMX2-CTNND1H3BSU7 103 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms