RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SPTLC3Q9NUV7 552 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 ZNHIT6Q9NWK9 470 aaKnown RBP18.38■□□□□ 0.53
VCP-202ENST00000417448 STAP1Q9ULZ2 295 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 CA5BQ9Y2D0 317 aa18.38■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3DA0A087WVF3 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3IA0A087WXS9 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3EA0A087X179 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3KA0A087X1G2 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 LY6G6EA0A0G2JKS1 128 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3FA6NER0 549 aaPredicted RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3LB9A6J9 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 LATS1O95835 1130 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3HP0C7X1 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 CKMT1AP12532 417 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 GOT1P17174 413 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TACR2P21452 398 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 GPD1P21695 349 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 MAT2AP31153 395 aaKnown RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 DRD3P35462 400 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 CTSOP43234 321 aaPredicted RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 CXCR3P49682 368 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 IRAK1P51617 712 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 METAP1P53582 386 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 ST8SIA6P61647 398 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 SFSWAPQ12872 951 aaKnown RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 NNTQ13423 1086 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3GQ6DHY5 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3CQ6IPX1 549 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 ALKBH5Q6P6C2 394 aaKnown RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 DCUN1D2Q6PH85 259 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 IQCHQ86VS3 1027 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 CIR1Q86X95 450 aaPredicted RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 TBC1D3Q8IZP1 549 aaPredicted RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 ATP6V0D2Q8N8Y2 350 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 ARHGEF26Q96DR7 871 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 PRICKLE1Q96MT3 831 aaPredicted RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 TKTL2Q9H0I9 626 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 THAP2Q9H0W7 228 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.37■□□□□ 0.53
VCP-202ENST00000417448 SATB2Q9UPW6 733 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 U3KQA8 63 aa18.37■□□□□ 0.53
VCP-202ENST00000417448 USP9XQ93008 2570 aaPredicted RBP18.37■□□□□ 0.53
VCP-202ENST00000417448 PMS2P1A4D2B8 440 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 FFAR2O15552 330 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 CCP110O43303 1012 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 PAGE1O75459 146 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 DGKAP23743 735 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 SDC4P31431 198 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 CCR1P32246 355 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 GSCP56915 257 aaPredicted RBP18.36■□□□□ 0.53
VCP-202ENST00000417448 NFKB2Q00653 900 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 ASTE1Q2TB18 679 aaPredicted RBP18.36■□□□□ 0.53
VCP-202ENST00000417448 MS4A13Q5J8X5 152 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 C3orf38Q5JPI3 329 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 MPP7Q5T2T1 576 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 PLEKHA7Q6IQ23 1121 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 IGF2-ASQ6U949 168 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 VPS36Q86VN1 386 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 MFN1Q8IWA4 741 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 STK40Q8N2I9 435 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 FAM172AQ8WUF8 416 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 WDCPQ9H6R7 721 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 NHEJ1Q9H9Q4 299 aaPredicted RBP18.36■□□□□ 0.53
VCP-202ENST00000417448 RRN3Q9NYV6 651 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 NENFQ9UMX5 172 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 HS3ST4Q9Y661 456 aa18.36■□□□□ 0.53
VCP-202ENST00000417448 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
VCP-202ENST00000417448 C5AR1P21730 350 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
VCP-202ENST00000417448 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 KDM1BQ8NB78 822 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 AZIN2Q96A70 460 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 FAM131CQ96AQ9 280 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 PRR11Q96HE9 360 aaPredicted RBP18.35■□□□□ 0.53
VCP-202ENST00000417448 BTBD6Q96KE9 485 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 BTN2A3PQ96KV6 586 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 PRMT1Q99873 361 aaKnown RBP18.35■□□□□ 0.53
VCP-202ENST00000417448 FAM117AQ9C073 453 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 OSBPL2Q9H1P3 480 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 DEF6Q9H4E7 631 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 SLC12A6Q9UHW9 1150 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 SLCO3A1Q9UIG8 710 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 TPX2Q9ULW0 747 aaKnown RBP18.35■□□□□ 0.53
VCP-202ENST00000417448 ERVW-1Q9UQF0 538 aa18.35■□□□□ 0.53
VCP-202ENST00000417448 EDDM13A0A1B0GTR0 161 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 AKR1B10O60218 316 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 ENDOD1O94919 500 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 ADH1BP00325 375 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 ASLP04424 464 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 MZF1P28698 734 aaPredicted RBP18.34■□□□□ 0.53
VCP-202ENST00000417448 HDAC4P56524 1084 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 OVGP1Q12889 678 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 LINC00303Q3SY05 128 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 POM121L1PQ3SYA9 428 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 FSCBQ5H9T9 825 aa18.34■□□□□ 0.53
VCP-202ENST00000417448 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms