RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CCDC14Q49A88 953 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 RAB6CQ53S08 254 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 STRADAQ7RTN6 431 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 NLRP14Q86W24 1093 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 PARGQ86W56 976 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 FAM181AQ8N9Y4 354 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 OR2AP1Q8NGE2 309 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 SLC30A5Q8TAD4 765 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 GPT2Q8TD30 523 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 ARHGEF2Q92974 986 aaKnown RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 RAB7BQ96AH8 199 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 UBL7Q96S82 380 aaPredicted RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 RAB6CQ9H0N0 254 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 OSBPL2Q9H1P3 480 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 USP29Q9HBJ7 922 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 FAM207AQ9NSI2 230 aaPredicted RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 NDFIP2Q9NV92 336 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 TMEM248Q9NWD8 314 aa14.68□□□□□ -0.06
PAF1-202ENST00000416728 IPO11Q9UI26 975 aaKnown RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 ARID1BQ8NFD5 2236 aaPredicted RBP14.68□□□□□ -0.06
PAF1-202ENST00000416728 NBEAQ8NFP9 2946 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 IGLON5A6NGN9 336 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 C2CD4BA6NLJ0 364 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 C16orf96A6NNT2 1141 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 FAM72CH0Y354 149 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 KRIT1O00522 736 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 OPA1O60313 960 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 RAMP2O60895 175 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 NEBLO76041 1014 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 LRIG2O94898 1065 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 CSF2P04141 144 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 GP1BAP07359 652 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 TPM2P07951 284 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 NME1P15531 152 aaKnown RBP14.67□□□□□ -0.06
PAF1-202ENST00000416728 GKP32189 559 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 SOX5P35711 763 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 ABL2P42684 1182 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 PTPN9P43378 593 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 POLR2FP61218 127 aaKnown RBP14.67□□□□□ -0.06
PAF1-202ENST00000416728 SNRPD1P62314 119 aaKnown RBP14.67□□□□□ -0.06
PAF1-202ENST00000416728 PDE1CQ14123 709 aaPredicted RBP14.67□□□□□ -0.06
PAF1-202ENST00000416728 TBC1D25Q3MII6 688 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 ZNF805Q5CZA5 627 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 FAM72AQ5TYM5 149 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 FAM72DQ6L9T8 149 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 TRIM72Q6ZMU5 477 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 FAM72BQ86X60 149 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 ZNF548Q8NEK5 533 aaPredicted RBP14.67□□□□□ -0.06
PAF1-202ENST00000416728 JOSD2Q8TAC2 188 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 TBC1D31Q96DN5 1066 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 LENG8Q96PV6 779 aaPredicted RBP14.67□□□□□ -0.06
PAF1-202ENST00000416728 DEPDC7Q96QD5 511 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 C1QTNF2Q9BXJ5 285 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 ABCG4Q9H172 646 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 MAGEH1Q9H213 219 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 VPS16Q9H269 839 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 NLRC4Q9NPP4 1024 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 PCDHB1Q9Y5F3 818 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 LOC400499M0QZD8 3231 aa14.67□□□□□ -0.06
PAF1-202ENST00000416728 GJB6O95452 261 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 GSRP00390 522 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 UGT2B4P06133 528 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 PLEKP08567 350 aaPredicted RBP14.66□□□□□ -0.06
PAF1-202ENST00000416728 MYF5P13349 255 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 CHRNB2P17787 502 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 KLK7P49862 253 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 FKBP15Q5T1M5 1219 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 CDCP2Q5VXM1 449 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 ZCCHC8Q6NZY4 707 aaKnown RBP14.66□□□□□ -0.06
PAF1-202ENST00000416728 LEKR1Q6ZMV7 388 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 ZNF354CQ86Y25 554 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 DENND6BQ8NEG7 585 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 ENOX1Q8TC92 643 aaKnown RBP14.66□□□□□ -0.06
PAF1-202ENST00000416728 FAM172AQ8WUF8 416 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 ASB12Q8WXK4 309 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 FCRL3Q96P31 734 aaPredicted RBP14.66□□□□□ -0.06
PAF1-202ENST00000416728 KLF6Q99612 283 aaPredicted RBP14.66□□□□□ -0.06
PAF1-202ENST00000416728 OSBPL1AQ9BXW6 950 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 PRORYQ9H606 182 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 NEU3Q9UQ49 428 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 ITM2BQ9Y287 266 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 CSNK1G3Q9Y6M4 447 aa14.66□□□□□ -0.06
PAF1-202ENST00000416728 ASXL3Q9C0F0 2248 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 LY6G6EA0A0G2JKS1 128 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 ZSCAN5CA6NGD5 496 aaPredicted RBP14.65□□□□□ -0.06
PAF1-202ENST00000416728 AQP9O43315 295 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 POP4O95707 220 aaKnown RBP14.65□□□□□ -0.06
PAF1-202ENST00000416728 MPOP05164 745 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 KRT3P12035 628 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 JUNDP17535 347 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 STAT1P42224 750 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 NSFP46459 744 aaKnown RBP14.65□□□□□ -0.06
PAF1-202ENST00000416728 HDAC4P56524 1084 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 JAM2P57087 298 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 CCDC173Q0VFZ6 552 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 KRT31Q15323 416 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 MYLK3Q32MK0 819 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 CCDC185Q8N715 623 aa14.65□□□□□ -0.06
PAF1-202ENST00000416728 IFI44Q8TCB0 444 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 232.3 ms