RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 LGMNQ99538 433 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 HEMGNQ9BXL5 484 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 HDAC8Q9BY41 377 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
ATG4B-207ENST00000415107 PCED1AQ9H1Q7 454 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 POLR3BQ9NW08 1133 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-207ENST00000415107 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
ATG4B-207ENST00000415107 HECAQ9UBI9 543 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-207ENST00000415107 DKK3Q9UBP4 350 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
ATG4B-207ENST00000415107 ATP8A1Q9Y2Q0 1164 aa12.09□□□□□ -0.47
ATG4B-207ENST00000415107 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 CFAP69A5D8W1 941 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ENC1O14682 589 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 MUSKO15146 869 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SOCS5O75159 536 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 MAP3K6O95382 1288 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 DNTTP04053 509 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 TUBB4AP04350 444 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ATP1A1P05023 1023 aaKnown RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ITGB7P26010 798 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 OXTRP30559 389 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 NUMBP49757 651 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SUOXP51687 545 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 GNG11P61952 73 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ETF1P62495 437 aaKnown RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 CCDC15Q0P6D6 951 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SIX1Q15475 284 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 USP39Q53GS9 565 aaKnown RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 TEX44Q53QW1 395 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 TSSK4Q6SA08 328 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ZSCAN30Q86W11 494 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 CHST14Q8NCH0 376 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 CCNYQ8ND76 341 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 GAB3Q8WWW8 586 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 TRIM44Q96DX7 344 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 RTP4Q96DX8 246 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SPACA7Q96KW9 195 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 WDR24Q96S15 920 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 NAP1L3Q99457 506 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 FERMT1Q9BQL6 677 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 TM6SF2Q9BZW4 377 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 TNKS2Q9H2K2 1166 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 KDM4CQ9H3R0 1056 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SEMA4AQ9H3S1 761 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 HOMER3Q9NSC5 361 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 BCCIPQ9P287 314 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SAE1Q9UBE0 346 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SARDHQ9UL12 918 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 HCN4Q9Y3Q4 1203 aa12.08□□□□□ -0.48
ATG4B-207ENST00000415107 SHROOM3Q8TF72 1996 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 HTRA2O43464 458 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-207ENST00000415107 LEFTY1O75610 366 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 IL1BP01584 269 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 HLA-DQB2P05538 268 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 RBP3P10745 1247 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 ACADMP11310 421 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 SLC8A1P32418 973 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 DRD3P35462 400 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 RGRP47804 291 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 FNTBP49356 437 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 DNA2P51530 1060 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 TPMTP51580 245 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 DMWDQ09019 674 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 AP1B1Q10567 949 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 WASHC5Q12768 1159 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 ZBTB17Q13105 803 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 OASLQ15646 514 aaKnown RBP12.07□□□□□ -0.48
ATG4B-207ENST00000415107 CCDC181Q5TID7 509 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 HEATR6Q6AI08 1181 aaKnown RBP12.07□□□□□ -0.48
ATG4B-207ENST00000415107 NCEH1Q6PIU2 408 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 BRAT1Q6PJG6 821 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 SLC36A4Q6YBV0 504 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 SRLQ86TD4 932 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 MMAAQ8IVH4 418 aaKnown RBP12.07□□□□□ -0.48
ATG4B-207ENST00000415107 PGBD5Q8N414 524 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 CNTD1Q8N815 330 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 ZC3H10Q96K80 434 aaKnown RBP12.07□□□□□ -0.48
ATG4B-207ENST00000415107 TEKT5Q96M29 485 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 NAPGQ99747 312 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-207ENST00000415107 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 SGK2Q9HBY8 427 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 RNF14Q9UBS8 474 aa12.07□□□□□ -0.48
ATG4B-207ENST00000415107 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
ATG4B-207ENST00000415107 TCRBV7S2A1N4TA0A589 114 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms