RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 GABRB2P47870 512 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 SULT1E1P49888 294 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 CCNHP51946 323 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 SLC20A2Q08357 652 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 PDE1CQ14123 709 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 ARHGAP44Q17R89 818 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 DEFB133Q30KQ1 61 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 CARD16Q5EG05 197 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 PERM1Q5SV97 790 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 ACBD5Q5T8D3 534 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 TRNP1Q6NT89 227 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 RBM44Q6ZP01 1051 aaKnown RBP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 EFL1Q7Z2Z2 1120 aaKnown RBP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 PLPP6Q8IY26 295 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 DENND6BQ8NEG7 585 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 TPCN2Q8NHX9 752 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 FEM1CQ96JP0 617 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 TBATAQ96M53 351 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 TBCBQ99426 244 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.39□□□□□ -0.43
LIMS2-210ENST00000413578 STAP1Q9ULZ2 295 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 NAV2Q8IVL1 2488 aa12.39□□□□□ -0.43
LIMS2-210ENST00000413578 PIEZO2Q9H5I5 2752 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 CPED1A4D0V7 1026 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 IGLON5A6NGN9 336 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 FOXN3O00409 490 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 TSPAN6O43657 245 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 GCATO75600 419 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 ENDOD1O94919 500 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 F9P00740 461 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 JUNDP17535 347 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 PON1P27169 355 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 OR1E1P30953 314 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 FLT3P36888 993 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 USP8P40818 1118 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 RECQLP46063 649 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 PTK2Q05397 1052 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 SLC25A52Q3SY17 297 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 LRRC31Q6UY01 552 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 GBP6Q6ZN66 633 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 SLC35F3Q8IY50 421 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 RBFAQ8N0V3 343 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 ISG20Q96AZ6 181 aaKnown RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 MED8Q96G25 268 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 TCEAL2Q9H3H9 227 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 TMEM51Q9NW97 253 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 FCF1Q9Y324 198 aaKnown RBP12.38□□□□□ -0.43
LIMS2-210ENST00000413578 ACTL7AQ9Y615 435 aa12.38□□□□□ -0.43
LIMS2-210ENST00000413578 C16orf96A6NNT2 1141 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 BIN1O00499 593 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 NTN3O00634 580 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-210ENST00000413578 FPGTO14772 594 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 AREL1O15033 823 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 PNMA6AP0CW24 399 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-210ENST00000413578 RBMS1P29558 406 aaKnown RBP12.37□□□□□ -0.43
LIMS2-210ENST00000413578 SNX16P57768 344 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 GNA12Q03113 381 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 DEUP1Q05D60 604 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 CLN3Q13286 438 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 NR0B2Q15466 257 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 EXOC3L4Q17RC7 722 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 MANEALQ5VSG8 457 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 XYLT1Q86Y38 959 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 FAM71AQ8IYT1 594 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 RAB7BQ96AH8 199 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
LIMS2-210ENST00000413578 LRRC61Q9BV99 259 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 ZYG11BQ9C0D3 744 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 CLPBQ9H078 707 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 ATP13A1Q9HD20 1204 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 PLCB1Q9NQ66 1216 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
LIMS2-210ENST00000413578 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 NEU3Q9UQ49 428 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 ITM2BQ9Y287 266 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 AHCTF1Q8WYP5 2266 aa12.37□□□□□ -0.43
LIMS2-210ENST00000413578 LMO7DNF2Z398 122 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 MUSKO15146 869 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 EFSO43281 561 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 ITGA2BP08514 1039 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 GKP32189 559 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 KRT9P35527 623 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 IGFALSP35858 605 aa12.36□□□□□ -0.43
LIMS2-210ENST00000413578 RNASE9P60153 205 aaKnown RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 NRG1Q02297 640 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-210ENST00000413578 SGCGQ13326 291 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms