RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TDRPQ86YL5 185 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 LURAP1LQ8IV03 231 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 KIAA2013Q8IYS2 634 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 ATOH1Q92858 354 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 JAKMIP2Q96AA8 810 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 FEM1CQ96JP0 617 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 BBS4Q96RK4 519 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 H2AFJQ9BTM1 129 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 SCNM1Q9BWG6 230 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 MAK16Q9BXY0 300 aaKnown RBP5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 ACTR5Q9H9F9 607 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 RRP7BPQ9NSQ0 103 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 NCKIPSDQ9NZQ3 722 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 FBXO40Q9UH90 709 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 HAO1Q9UJM8 370 aa5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P31-201ENST00000413333 ADGRF5Q8IZF2 1346 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 A0A1W2PQ09 198 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 FRMD3A2A2Y4 597 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 FAM157AC9JC47 383 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 NEURL1O76050 574 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 TMCC1O94876 653 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 KRT4P19013 534 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 CDH2P19022 906 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 TNFRSF1AP19438 455 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 WT1P19544 449 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 MCM3P25205 808 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 PSMB10P40306 273 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 PRAMEP78395 509 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 PMPCAQ10713 525 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 EPS8Q12929 822 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 PGM5Q15124 567 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 CCDC96Q2M329 555 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 PROSER3Q2NL68 480 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 SYTL3Q4VX76 610 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 GKAP1Q5VSY0 366 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 TMEM154Q6P9G4 183 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 CPLX2Q6PUV4 134 aaKnown RBP5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 CHST9Q7L1S5 443 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 IGFN1Q86VF2 1251 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 FAM9BQ8IZU0 186 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 RASSF8Q8NHQ8 419 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 PSPC1Q8WXF1 523 aaKnown RBP5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 SARAFQ96BY9 339 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 ZNF419Q96HQ0 510 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 MAP7D2Q96T17 732 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 KIF9Q9HAQ2 790 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 SLC6A13Q9NSD5 602 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 FAM96BQ9Y3D0 163 aa5.03□□□□□ -1.6
HMGB3P31-201ENST00000413333 AOX1Q06278 1338 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 TYW5A2RUC4 315 aaKnown RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 DDTLA6NHG4 134 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 A8MV72 311 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 USP17L23D6RBM5 183 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 FOXN1O15353 648 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 UGDHO60701 494 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 HEXAP06865 529 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 CD63P08962 238 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 YWHAQP27348 245 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 EIF2DP41214 584 aaKnown RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 DPP6P42658 865 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 PIP4K2AP48426 406 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 CDH8P55286 799 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZNF268Q14587 947 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 IRF3Q14653 427 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 RNPS1Q15287 305 aaKnown RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 COL28A1Q2UY09 1125 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 TXNDC8Q6A555 127 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 AAGABQ6PD74 315 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 TRIM74Q86UV6 250 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 TRIM73Q86UV7 250 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 ARHGAP12Q8IWW6 846 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 DHX40Q8IX18 779 aaKnown RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 ADGRF2Q8IZF7 708 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 CMASQ8NFW8 434 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 MAP4K1Q92918 833 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 ZKSCAN4Q969J2 545 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 PABPC5Q96DU9 382 aaKnown RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 MMABQ96EY8 250 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 AP1M1Q9BXS5 423 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 IKZF4Q9H2S9 585 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 PLEKHB1Q9UF11 243 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 CHORDC1Q9UHD1 332 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 UTS2RQ9UKP6 389 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 LAMP3Q9UQV4 416 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 HS3ST3A1Q9Y663 406 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 MST1RQ04912 1400 aa5.02□□□□□ -1.61
HMGB3P31-201ENST00000413333 TSPY2A6NKD2 308 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 C2CD4BA6NLJ0 364 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 RHODO00212 210 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 ERAL1O75616 437 aaKnown RBP5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TFP02787 698 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TSPY3P0CV98 308 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 TSPY8P0CW00 308 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 IL7RP16871 459 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 NNMTP40261 264 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 PTH2RP49190 550 aa5.01□□□□□ -1.61
HMGB3P31-201ENST00000413333 CLCNKBP51801 687 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms