RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 EFL1Q7Z2Z2 1120 aaKnown RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 RYBPQ8N488 228 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 BTN2A2Q8WVV5 523 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 C18orf8Q96DM3 657 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 CCDC97Q96F63 343 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 ATXN7L3BQ96GX2 97 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 SLC46A1Q96NT5 459 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 HAPLN3Q96S86 360 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 C1QTNF2Q9BXJ5 285 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 ZYG11BQ9C0D3 744 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 ZDHHC6Q9H6R6 413 aa17.02■□□□□ 0.32
MRPL55-220ENST00000411464 HECAQ9UBI9 543 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-220ENST00000411464 TP53BP1Q12888 1972 aaPredicted RBP17.02■□□□□ 0.31
MRPL55-220ENST00000411464 ZNF462Q96JM2 2506 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 EME2A4GXA9 379 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-220ENST00000411464 TPP1O14773 563 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 SCNN1AP37088 669 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 MTIF2P46199 727 aaKnown RBP17.01■□□□□ 0.31
MRPL55-220ENST00000411464 RPIAP49247 311 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 GNA12Q03113 381 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 RBM44Q6ZP01 1051 aaKnown RBP17.01■□□□□ 0.31
MRPL55-220ENST00000411464 PARS2Q7L3T8 475 aaKnown RBP17.01■□□□□ 0.31
MRPL55-220ENST00000411464 DRC7Q8IY82 874 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 GLMNQ92990 594 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 RAB7BQ96AH8 199 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-220ENST00000411464 SPASTQ9UBP0 616 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 KLF15Q9UIH9 416 aa17.01■□□□□ 0.31
MRPL55-220ENST00000411464 FCF1Q9Y324 198 aaKnown RBP17.01■□□□□ 0.31
MRPL55-220ENST00000411464 MYLKQ15746 1914 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 MUSKO15146 869 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 PNMA6AP0CW24 399 aaPredicted RBP17■□□□□ 0.31
MRPL55-220ENST00000411464 ETFBP38117 255 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 GABRB2P47870 512 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 THOP1P52888 689 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 ARF5P84085 180 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 ATMQ13315 3056 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 PTK2BQ14289 1009 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 FOXR1Q6PIV2 292 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 ASB12Q8WXK4 309 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 ISG20Q96AZ6 181 aaKnown RBP17■□□□□ 0.31
MRPL55-220ENST00000411464 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 SIX2Q9NPC8 291 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 ZNF212Q9UDV6 495 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 AJAP1Q9UKB5 411 aaPredicted RBP17■□□□□ 0.31
MRPL55-220ENST00000411464 PCDHGA8Q9Y5G5 932 aa17■□□□□ 0.31
MRPL55-220ENST00000411464 C16orf96A6NNT2 1141 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 SPINT1O43278 529 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 TCEA3O75764 348 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 CDH5P33151 784 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-220ENST00000411464 PFN3P60673 137 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 EIF2B5Q13144 721 aaKnown RBP16.99■□□□□ 0.31
MRPL55-220ENST00000411464 BECN1Q14457 450 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 POLD3Q15054 466 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-220ENST00000411464 ZNF805Q5CZA5 627 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 PRRT3Q5FWE3 981 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 CRTC1Q6UUV9 634 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 FAM131BQ86XD5 332 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 XYLT1Q86Y38 959 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 PLPP6Q8IY26 295 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 ARL14Q8N4G2 192 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 MSANTD4Q8NCY6 345 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 DENND6BQ8NEG7 585 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 SNRNP27Q8WVK2 155 aaKnown RBP16.99■□□□□ 0.31
MRPL55-220ENST00000411464 NAT6Q93015 286 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 ARHGEF26Q96DR7 871 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 PPARGC1AQ9UBK2 798 aaKnown RBP16.99■□□□□ 0.31
MRPL55-220ENST00000411464 APOBEC3BQ9UH17 382 aaKnown RBP16.99■□□□□ 0.31
MRPL55-220ENST00000411464 HPCAL4Q9UM19 191 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 ENTPD2Q9Y5L3 495 aa16.99■□□□□ 0.31
MRPL55-220ENST00000411464 CXorf51AA0A1B0GTR3 108 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 FAM170AA1A519 330 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 GOLGA8SH3BPF8 625 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 KRIT1O00522 736 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 ANXA6P08133 673 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 C6P13671 934 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 CYP11B1P15538 503 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 FLT3P36888 993 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 ACVRL1P37023 503 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 ADKP55263 362 aaKnown RBP16.98■□□□□ 0.31
MRPL55-220ENST00000411464 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
MRPL55-220ENST00000411464 RAPGEF1Q13905 1077 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 LY6DQ14210 128 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 TPD52L1Q16890 204 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-220ENST00000411464 TPRG1LQ5T0D9 272 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 ARTNQ5T4W7 220 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 IRF2BP1Q8IU81 584 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 OR6K2Q8NGY2 324 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 WDR36Q8NI36 951 aaKnown RBP16.98■□□□□ 0.31
MRPL55-220ENST00000411464 WDR48Q8TAF3 677 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 TTC9Q92623 222 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 CFAP57Q96MR6 1250 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 BOCQ9BWV1 1114 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 SLC13A1Q9BZW2 595 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 ACTL7AQ9Y615 435 aa16.98■□□□□ 0.31
MRPL55-220ENST00000411464 NYNRINQ9P2P1 1898 aaKnown RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 A0A1W2PNU3 283 aaPredicted RBP16.97■□□□□ 0.31
MRPL55-220ENST00000411464 B8ZZF3 427 aa16.97■□□□□ 0.31
MRPL55-220ENST00000411464 LMO7DNF2Z398 122 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms