RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 GALNT4Q8N4A0 578 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SLC39A7Q92504 469 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 BIRC7Q96CA5 298 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CDK5RAP3Q96JB5 506 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 DHRS1Q96LJ7 313 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TPK1Q9H3S4 243 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ATXN10Q9UBB4 475 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 LRRC14BA6NHZ5 514 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 LSM1O15116 133 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 BAG2O95816 211 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NAT2P11245 290 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CKBP12277 381 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TSPAN8P19075 237 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ACO1P21399 889 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CBLP22681 906 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CD151P48509 253 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PMS2P3Q13401 168 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CLUL1Q15846 466 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CA9Q16790 459 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 AASDHQ4L235 1098 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SLC9B1Q4ZJI4 515 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SYCE2Q6PIF2 218 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 WDR53Q7Z5U6 358 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NPAS4Q8IUM7 802 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MYOCDQ8IZQ8 938 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SIX5Q8N196 739 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 FLCNQ8NFG4 579 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 FAM172AQ8WUF8 416 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 USP13Q92995 863 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TTC17Q96AE7 1141 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 EME1Q96AY2 570 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CCDC97Q96F63 343 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 FBXL20Q96IG2 436 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SMIM14Q96QK8 99 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MYADMQ96S97 322 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MPHOSPH6Q99547 160 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TMEM120AQ9BXJ8 343 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PCDH18Q9HCL0 1135 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PTPRHQ9HD43 1115 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NXF1Q9UBU9 619 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PCDHA12Q9UN75 941 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CIB4A0PJX0 185 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 FAM47DPA6NHR8 397 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 UPK1AO00322 258 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CDK2AP1O14519 115 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SORBS3O60504 671 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MAFO75444 373 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PSMC3P17980 439 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MARK3P27448 753 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PTPN4P29074 926 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CA8P35219 290 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 RPL22P35268 128 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF135P52742 658 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 GBE1Q04446 702 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CKAP4Q07065 602 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SPAG1Q07617 926 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 IFFO1Q0D2I5 559 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF460Q14592 562 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 C16orf72Q14CZ0 275 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TRIP10Q15642 601 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 C10orf76Q5T2E6 689 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 GTF2IRD2BQ6EKJ0 949 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF720Q7Z2F6 126 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NEK8Q86SG6 692 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 GTF2IRD2Q86UP8 949 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ADGRF4Q8IZF3 695 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CAMKK1Q8N5S9 505 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NATD1Q8N6N6 113 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 NAT8LQ8N9F0 302 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TTC13Q8NBP0 860 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PPFIBP2Q8ND30 876 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 PTCD2Q8WV60 388 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TRMT61AQ96FX7 289 aaKnown RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF512BQ96KM6 892 aaPredicted RBP3.18□□□□□ -1.9
RGPD3-202ENST00000409886 OSBPL11Q9BXB4 747 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 LRRC27Q9C0I9 530 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 GLT8D2Q9H1C3 349 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 TRABDQ9H4I3 376 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 CAB39LQ9H9S4 337 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 SIRPGQ9P1W8 387 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 MTORP42345 2549 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 OBSL1O75147 1896 aa3.18□□□□□ -1.9
RGPD3-202ENST00000409886 H3BUI4 141 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TPST1O60507 370 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 LRCH4O75427 683 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 TM7SF2O76062 418 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 AGTP01019 485 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 HNRNPCP07910 306 aaKnown RBP eCLIP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 FGF3P11487 239 aaPredicted RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 CYP11B1P15538 503 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 SHMT1P34896 483 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 PIGAP37287 484 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ELK3P41970 407 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 RAP1GAPP47736 663 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 ALDH3B2P48448 385 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 AQP5P55064 265 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 GPLD1P80108 840 aa3.17□□□□□ -1.9
RGPD3-202ENST00000409886 MRPS9P82933 396 aaKnown RBP3.17□□□□□ -1.9
RGPD3-202ENST00000409886 FOLH1Q04609 750 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms