RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
CHMP3-204ENST00000409727 IL1RAPL1Q9NZN1 696 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 BFARQ9NZS9 450 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 CLEC1BQ9P126 229 aa12.63□□□□□ -0.39
CHMP3-204ENST00000409727 NOVA2Q9UNW9 492 aaKnown RBP12.63□□□□□ -0.39
CHMP3-204ENST00000409727 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 SLC9A3R1O14745 358 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 TRIM24O15164 1050 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 PAPLNO95428 1278 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 CD160O95971 181 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 IVLP07476 585 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 CTSOP43234 321 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 SKOR1P84550 965 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 RFTN1Q14699 578 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 POU6F1Q14863 301 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 PLEKHG6Q3KR16 790 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 TRMT10BQ6PF06 316 aaKnown RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 UNC5BQ8IZJ1 945 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 BPIFB1Q8TDL5 484 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 ASIC4Q96FT7 647 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 PPP1R2P1Q96PQ5 205 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 PSKH2Q96QS6 385 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 MGME1Q9BQP7 344 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 NOD2Q9HC29 1040 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 SCUBE2Q9NQ36 999 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 HAUS2Q9NVX0 235 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 INTS6Q9UL03 887 aaKnown RBP12.62□□□□□ -0.39
CHMP3-204ENST00000409727 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
CHMP3-204ENST00000409727 HEPACAM2A8MVW5 462 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 PENKP01210 267 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ARSAP15289 507 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TCF3P15923 654 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 PGAM1P18669 254 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 SP100P23497 879 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 HPDP32754 393 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ADRA1AP35348 466 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 RHOAP61586 193 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TNK2Q07912 1038 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TMED2Q15363 201 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 KBTBD12Q3ZCT8 623 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 FUT11Q495W5 492 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 PITRM1Q5JRX3 1037 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ATXN7L2Q5T6C5 722 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 DENND5AQ6IQ26 1287 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CES5AQ6NT32 575 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CTAGE3PQ8IX95 158 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 OSCP1Q8WVF1 389 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TMEM109Q9BVC6 243 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TM6SF2Q9BZW4 377 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ROPN1BQ9BZX4 212 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 EBF3Q9H4W6 596 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ACSS3Q9H6R3 686 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ROPN1Q9HAT0 212 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 RPS6KL1Q9Y6S9 549 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 SMAD6O43541 496 aaKnown RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CYP17A1P05093 508 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 SERPINF2P08697 491 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GCAP28676 217 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 STX2P32856 288 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 STK19P49842 368 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 SEPT6Q14141 434 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GALNT3Q14435 633 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 DHCR24Q15392 516 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TANGO2Q6ICL3 276 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 RETSATQ6NUM9 610 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 RANBP10Q6VN20 620 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 KLHDC8BQ8IXV7 354 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CYP4X1Q8N118 509 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 OR6K2Q8NGY2 324 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 TTC8Q8TAM2 541 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GSDMBQ8TAX9 411 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 MYLIPQ8WY64 445 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 ZNF669Q96BR6 464 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 OTUB2Q96DC9 234 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 IFT43Q96FT9 208 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 NSMCE3Q96MG7 304 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 VPS45Q9NRW7 570 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GDE1Q9NZC3 331 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 GGA2Q9UJY4 613 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CDH7Q9ULB5 785 aa12.61□□□□□ -0.39
CHMP3-204ENST00000409727 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-204ENST00000409727 CXorf49A8MYA2 514 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 HMGB1P1B2RPK0 211 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 INSIG1O15503 277 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 BNIP3LO60238 219 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 SPAG6O75602 509 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 ADH5P11766 374 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 PABPC1P11940 636 aaKnown RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 TSHRP16473 764 aa12.6□□□□□ -0.39
CHMP3-204ENST00000409727 HOXB8P17481 243 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-204ENST00000409727 NPY2RP49146 381 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms