RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GMNCA6NCL1 334 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 IQCF5A8MTL0 148 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 K7ERQ8 282 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 CHEK2O96017 543 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 PYGLP06737 847 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 STX3Q13277 289 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 PTPRNQ16849 979 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 MPPE1Q53F39 396 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 TTC39BQ5VTQ0 682 aaPredicted RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 DUPD1Q68J44 220 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ERAP2Q6P179 960 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 MRPL10Q7Z7H8 261 aaKnown RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 SLC26A11Q86WA9 606 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 LINC01599Q8WXQ3 324 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 CPT1BQ92523 772 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 IGSF8Q969P0 613 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 IL1RL2Q9HB29 575 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 CASS4Q9NQ75 786 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNX13-202ENST00000409604 SLCO3A1Q9UIG8 710 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 RHOQP17081 205 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 TNK2Q07912 1038 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ZNF844Q08AG5 666 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 MS4A13Q5J8X5 152 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 MMAAQ8IVH4 418 aaKnown RBP11.54□□□□□ -0.56
SNX13-202ENST00000409604 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 TRIM48Q8IWZ4 208 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 SLC22A12Q96S37 553 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 NPY6RQ99463 290 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 AHCTF1Q8WYP5 2266 aa11.54□□□□□ -0.56
SNX13-202ENST00000409604 A0A096LPK6 155 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 MYL2P10916 166 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 TYRP14679 529 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ZNF132P52740 706 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 IL1RL1Q01638 556 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 RSPO2Q6UXX9 243 aaPredicted RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 IFNEQ86WN2 208 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 RTL3Q8N8U3 475 aaKnown RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 MED8Q96G25 268 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 KLHL32Q96NJ5 620 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 TOX2Q96NM4 488 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 CACNA2D2Q9NY47 1150 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 WWOXQ9NZC7 414 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ACOT9Q9Y305 439 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 SPTA1P02549 2419 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ZNF840PA6NDX5 716 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 BTNL10A8MVZ5 291 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ITGAVP06756 1048 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 COL6A1P12109 1028 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 BGNP21810 368 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ARFIP2P53365 341 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 PLCL1Q15111 1095 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ZBTB6Q15916 424 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ESRP1Q6NXG1 681 aaKnown RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 TRMT10BQ6PF06 316 aaKnown RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 HMGB4Q8WW32 186 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 KLHL29Q96CT2 875 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 FOPNLQ96NB1 174 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ZNHIT2Q9UHR6 403 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 RNF112Q9ULX5 631 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ARAP2Q8WZ64 1704 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 A0A1W2PPM1 405 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 OR2AG2A6NM03 316 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 LEFTY2O00292 366 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 TRIM24O15164 1050 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 PIGNO95427 931 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 MSH3P20585 1137 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 PTPN3P26045 913 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 HMOX2P30519 316 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 PXNP49023 591 aaPredicted RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 TCP10LQ8TDR4 215 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 ZNF446Q9NWS9 450 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 PCYOX1Q9UHG3 505 aa11.53□□□□□ -0.56
SNX13-202ENST00000409604 APOBEC2Q9Y235 224 aaKnown RBP11.53□□□□□ -0.56
SNX13-202ENST00000409604 TTC3P53804 2025 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 VPS26AO75436 327 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 CIB2O75838 187 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 TMEM63AO94886 807 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 PFKMP08237 780 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 ESRRAP11474 423 aaPredicted RBP11.52□□□□□ -0.56
SNX13-202ENST00000409604 HNF4AP41235 474 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 CD151P48509 253 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 RGS4P49798 205 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 THOP1P52888 689 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 NCBP2-AS2Q69YL0 99 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 SCIMPQ6UWF3 145 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 C12orf50Q8NA57 414 aaPredicted RBP11.52□□□□□ -0.56
SNX13-202ENST00000409604 IRGQQ8WZA9 623 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 RNF31Q96EP0 1072 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 TSSK1BQ9BXA7 367 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 SEZ6LQ9BYH1 1024 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 SLC7A5P2Q9GIP4 190 aa11.52□□□□□ -0.56
SNX13-202ENST00000409604 TLR6Q9Y2C9 796 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms