RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 AP1S1P61966 158 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 TXNDC11Q6PKC3 985 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 RBFAQ8N0V3 343 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 POP5Q969H6 163 aaKnown RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 DPY30Q9C005 99 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 TCF7L2Q9NQB0 619 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 RAB23Q9ULC3 237 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 NCF1BA6NI72 391 aaPredicted RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 NCF1CA8MVU1 366 aaPredicted RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 NCF1P14598 390 aaPredicted RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 RPL3P39023 403 aaKnown RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 DSG1Q02413 1049 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 WASHC2DQ5SRD0 308 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 DAW1Q8N136 415 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 KRT78Q8N1N4 520 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 MAB21L3Q8N8X9 362 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 METTL6Q8TCB7 284 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 TCP10LQ8TDR4 215 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 CKAP2Q8WWK9 683 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 PCED1BQ96HM7 432 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 SAMD11Q96NU1 681 aa16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 TRPM3Q9HCF6 1732 aaPredicted RBP16.97■□□□□ 0.31
PCDHA13-202ENST00000409494 ALOX15BO15296 676 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 PSMA4P25789 261 aaKnown RBP16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 CORO1AP31146 461 aaKnown RBP16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 OCA2Q04671 838 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 ZNF618Q5T7W0 954 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 WLSQ5T9L3 541 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 CYP4Z1Q86W10 505 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 PSME2Q9UL46 239 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 DNM1LO00429 736 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 BTN3A1O00481 513 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 NOL4O94818 638 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 MLYCDO95822 493 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 ASLP04424 464 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 WNT3AP56704 352 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 ELF3P78545 371 aaPredicted RBP16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 CLEC4FQ8N1N0 589 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 KREMEN2Q8NCW0 462 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 COPS8Q99627 209 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 H2AFY2Q9P0M6 372 aaPredicted RBP16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 TAGLN3Q9UI15 199 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 ZSCAN9O15535 394 aaPredicted RBP16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 FCGR1AP12314 374 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 ATP5F1P24539 256 aaPredicted RBP16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 SLC1A6P48664 564 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 TAS2R40P59535 323 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 FAM228AQ86W67 206 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 CHPFQ8IZ52 775 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 RFWD2Q8NHY2 731 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 KCTD13Q8WZ19 329 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 P2RY11Q96G91 374 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 SHCBP1LQ9BZQ2 653 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 ACSS3Q9H6R3 686 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 KLHL28Q9NXS3 571 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 SFMBT1Q9UHJ3 866 aa16.96■□□□□ 0.31
PCDHA13-202ENST00000409494 CHRNB3Q05901 458 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 BTKQ06187 659 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 FLOT2Q14254 428 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 JADE3Q92613 823 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 NTAN1Q96AB6 310 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 VPS33AQ96AX1 596 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 ACOX2Q99424 681 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 GDAP2Q9NXN4 497 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 C15orf41Q9Y2V0 281 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 PCDHB1Q9Y5F3 818 aa16.96■□□□□ 0.3
PCDHA13-202ENST00000409494 SNTNA6NMZ2 147 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 PCNAP12004 261 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 FMO4P31512 558 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 PBX3P40426 434 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 NUDT2P50583 147 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 GAD2Q05329 585 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 ARL15Q9NXU5 204 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 FAM47E-STBD1D6RA91 191 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 IRAK2O43187 625 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 SGTAO43765 313 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 MARCKSL1P49006 195 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 FAAP100Q0VG06 881 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 RFTN1Q14699 578 aaPredicted RBP16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 IRAK1BP1Q5VVH5 260 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 C1orf232A0A0U1RR37 186 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 CACNB4O00305 520 aaPredicted RBP16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 NDST3O95803 873 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 IL1BP01584 269 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 DRD4P21917 467 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 EDNRBP24530 442 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 NFYCQ13952 458 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 LLGL2Q6P1M3 1020 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 KIAA1324Q6UXG2 1013 aaKnown RBP16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 CORO1CQ9ULV4 474 aaPredicted RBP16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 LRCH4O75427 683 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 ADSSP30520 456 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 SDHAF4Q5VUM1 108 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 PIWIL4Q7Z3Z4 852 aaKnown RBP16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 TMEM237Q96Q45 408 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 HAPLN3Q96S86 360 aa16.95■□□□□ 0.3
PCDHA13-202ENST00000409494 SH3GL2Q99962 352 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms