RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 STX3Q13277 289 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 UGP2Q16851 508 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 FBXW10Q5XX13 1052 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 IL31Q6EBC2 164 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 ARRDC2Q8TBH0 407 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 YME1L1Q96TA2 773 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 MAGEH1Q9H213 219 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 RHOJQ9H4E5 214 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 ATP13A1Q9HD20 1204 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 UXTQ9UBK9 157 aaPredicted RBP20.95■□□□□ 0.94
USP39-203ENST00000409470 SLC39A10Q9ULF5 831 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 MIA3Q5JRA6 1907 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 LTBP2Q14767 1821 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 C2orf78A6NCI8 922 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 KLKB1P03952 638 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 PROCP04070 461 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 HADHAP40939 763 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 ARCN1P48444 511 aaKnown RBP20.95■□□□□ 0.94
USP39-203ENST00000409470 NCALDP61601 193 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 GRM3Q14832 879 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 DLG2Q15700 870 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 ZCCHC23Q6ZST2 131 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 ZC3HC1Q86WB0 502 aaKnown RBP20.95■□□□□ 0.94
USP39-203ENST00000409470 OR7D4Q8NG98 312 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 SEMA3CQ99985 751 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 MCMBPQ9BTE3 642 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 SPON2Q9BUD6 331 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 RNF38Q9H0F5 515 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 RETREG1Q9H6L5 497 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 MRPL17Q9NRX2 175 aaKnown RBP20.95■□□□□ 0.94
USP39-203ENST00000409470 TREX1Q9NSU2 369 aa20.95■□□□□ 0.94
USP39-203ENST00000409470 MYLKQ15746 1914 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 EFCAB14O75071 495 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 GSRP00390 522 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 ACRP10323 421 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 RAG1P15918 1043 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 SAT1P21673 171 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 KCNA4P22459 653 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 EPHB3P54753 998 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 CTBP1Q13363 440 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 TTC31Q49AM3 519 aaPredicted RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 CES4AQ5XG92 561 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 RAPH1Q70E73 1250 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 DNAJB7Q7Z6W7 309 aaPredicted RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 DENND6AQ8IWF6 608 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 CNTN4Q8IWV2 1026 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 PRICKLE1Q96MT3 831 aaPredicted RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 GPR22Q99680 433 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 TMEM120AQ9BXJ8 343 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 SLC40A1Q9NP59 571 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 ZNF358Q9NW07 568 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 TRIM43BA6NCK2 446 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 CLDN11O75508 207 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 AHSGP02765 367 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 C2P06681 752 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 DLDP09622 509 aaKnown RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 ARNTP27540 789 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 CA8P35219 290 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 GJA8P48165 433 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 PPP3CCP48454 512 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 OCRLQ01968 901 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 IHHQ14623 411 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 CCDC153Q494R4 210 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 KIAA0930Q6ICG6 404 aaPredicted RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 CRLF3Q8IUI8 442 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 PLD6Q8N2A8 252 aaKnown RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 BBS5Q8N3I7 341 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 ACVR1CQ8NER5 493 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 TRIM43Q96BQ3 446 aaPredicted RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 ZNF599Q96NL3 588 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 ZNF395Q9H8N7 513 aaPredicted RBP20.94■□□□□ 0.94
USP39-203ENST00000409470 PDFQ9HBH1 243 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 WBP1LQ9NX94 342 aa20.94■□□□□ 0.94
USP39-203ENST00000409470 MPP1Q00013 466 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 USP10Q14694 798 aaKnown RBP20.93■□□□□ 0.94
USP39-203ENST00000409470 PCLAFQ15004 111 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 ARMC3Q5W041 872 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 MTDHQ86UE4 582 aaKnown RBP20.93■□□□□ 0.94
USP39-203ENST00000409470 IFT43Q96FT9 208 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 RANBP9Q96S59 729 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 FAM167BQ9BTA0 163 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 KLF16Q9BXK1 252 aaPredicted RBP20.93■□□□□ 0.94
USP39-203ENST00000409470 KCNK13Q9HB14 408 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 SMPD4Q9NXE4 827 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 PCDH10Q9P2E7 1040 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 ZFP69BQ9UJL9 534 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 TLK1Q9UKI8 766 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 AGO1Q9UL18 857 aaKnown RBP20.93■□□□□ 0.94
USP39-203ENST00000409470 INSL5Q9Y5Q6 135 aa20.93■□□□□ 0.94
USP39-203ENST00000409470 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 CARNS1A5YM72 827 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 TSPAN3O60637 253 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 SNNO75324 88 aaPredicted RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 PRKCGP05129 697 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 OXCT1P55809 520 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 IRF9Q00978 393 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 ZNF177Q13360 481 aaPredicted RBP20.92■□□□□ 0.94
USP39-203ENST00000409470 SIRPB2Q5JXA9 342 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 ADGRF1Q5T601 910 aa20.92■□□□□ 0.94
USP39-203ENST00000409470 MBLAC2Q68D91 279 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms