RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 DENND6BQ8NEG7 585 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 PCDH19Q8TAB3 1148 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 TRIM62Q9BVG3 475 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 SLC12A9Q9BXP2 914 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 SIRPGQ9P1W8 387 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 GULP1Q9UBP9 304 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 GGT7Q9UJ14 662 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 ANAPC2Q9UJX6 822 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 TBC1D30Q9Y2I9 924 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 A0A1W2PQ27 194 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 A0A1W2PQ64 194 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 A0A1W2PQC6 194 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 IGLON5A6NGN9 336 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 C9orf172C9J069 976 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 CLDN11O75508 207 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 IGFALSP35858 605 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 GPD2P43304 727 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 THOP1P52888 689 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 KRT83P78385 493 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 LINGO4Q6UY18 593 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 ZSCAN30Q86W11 494 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 SLC13A1Q9BZW2 595 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 FAM204AQ9H8W3 233 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 KCNK4Q9NYG8 393 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 SLC12A6Q9UHW9 1150 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 PCDHB4Q9Y5E5 795 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 PCDHB11Q9Y5F2 797 aa13.1□□□□□ -0.31
CHRNA1-203ENST00000409219 SYNJ2BP-COX16A0A087WUM0 186 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 ZNF821O75541 412 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 MYL1P05976 194 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 PTMSP20962 102 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 L1CAMP32004 1257 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 CCR1P32246 355 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 NOS2P35228 1153 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 ABL2P42684 1182 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 CLCN6P51797 869 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 SGCGQ13326 291 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 EDRF1Q3B7T1 1238 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 DCAF4L2Q8NA75 395 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 JPH3Q8WXH2 748 aaPredicted RBP13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 KAT5Q92993 513 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 USP7Q93009 1102 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 COX16Q9P0S2 106 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 ITM2BQ9Y287 266 aa13.09□□□□□ -0.31
CHRNA1-203ENST00000409219 E5RJQ4 531 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 CNTN5O94779 1100 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 ENDOD1O94919 500 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 SLC2A3P11169 496 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 CD82P27701 267 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 MAPK10P53779 464 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 CDH4P55283 916 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 YWHAZP63104 245 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 ZFP36L1Q07352 338 aaKnown RBP13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 NCAPHQ15003 741 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 TCEA2Q15560 299 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 MACC1Q6ZN28 852 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 CENPTQ96BT3 561 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 LRRC4CQ9HCJ2 640 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 DOLKQ9UPQ8 538 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 PLAAQ9Y263 795 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 HS3ST4Q9Y661 456 aa13.08□□□□□ -0.32
CHRNA1-203ENST00000409219 A0A0D9SEW6 157 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 ENO4A6NNW6 628 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 RHOCP08134 193 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 ACADSBP45954 432 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 RECQLP46063 649 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 PPARDQ03181 441 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 TAF5Q15542 800 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 C5orf22Q49AR2 442 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 ALFQ53S48 1182 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 TMPRSS9Q7Z410 1059 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 CCNJLQ8IV13 435 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 TMEM159Q96B96 161 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 CMKLR1Q99788 373 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-203ENST00000409219 CHD5Q8TDI0 1954 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 M0QYT0 321 aa13.06□□□□□ -0.32
CHRNA1-203ENST00000409219 CETN3O15182 167 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms