RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 B3GALNT2Q8NCR0 500 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 ZNF398Q8TD17 642 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 KLHL32Q96NJ5 620 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 ING2Q9H160 280 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 MID1IP1Q9NPA3 183 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 USP22Q9UPT9 525 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 SRP72O76094 671 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 KCNH1O95259 989 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 DHRS4L1P0CG22 281 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 TAF6P49848 677 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 INHBCP55103 352 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 ADARP55265 1226 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 CHST13Q8NET6 341 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 MTFMTQ96DP5 389 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 FBXL20Q96IG2 436 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 UPF3AQ9H1J1 476 aaKnown RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 LHX5Q9H2C1 402 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 ALG2Q9H553 416 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
SNX13-201ENST00000409076 ARID1BQ8NFD5 2236 aaPredicted RBP8.43□□□□□ -1.06
SNX13-201ENST00000409076 TREHO43280 583 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 NOL3O60936 208 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 GUCA1CO95843 209 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 AHSGP02765 367 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 IRF1P10914 325 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 EFNA1P20827 205 aaPredicted RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 PTPRRQ15256 657 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CFAP52Q8N1V2 620 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 RIN3Q8TB24 985 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 HEXDCQ8WVB3 486 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 SIKE1Q9BRV8 207 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 AP4S1Q9Y587 144 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 COPG1Q9Y678 874 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 C1orf232A0A0U1RR37 186 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ANGPT2O15123 496 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 HDAC3O15379 428 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 B4GAT1O43505 415 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 DLX3O60479 287 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 USP2O75604 605 aaPredicted RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 LRIG2O94898 1065 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ATG7O95352 703 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 TGDSO95455 350 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 C22orf31O95567 290 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 TBX18O95935 607 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 GNAO1P09471 354 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ZFXP17010 805 aaPredicted RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 KCNA5P22460 613 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CD86P42081 329 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 SNX16P57768 344 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 IMPG1Q17R60 797 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ARL13BQ3SXY8 428 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 BTBD8Q5XKL5 378 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CYP4V2Q6ZWL3 525 aaPredicted RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 PDZD4Q76G19 769 aaPredicted RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 PSTKQ8IV42 348 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 LILRA2Q8N149 483 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 TSPAN14Q8NG11 270 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CLHC1Q8NHS4 586 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CANT1Q8WVQ1 401 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 TMEM74Q96NL1 305 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 TMEM209Q96SK2 561 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 SLC29A1Q99808 456 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ZNF670Q9BS34 389 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 NIFKQ9BYG3 293 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 MROH8Q9H579 483 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 NDFIP2Q9NV92 336 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 AASSQ9UDR5 926 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ATP8B3O60423 1300 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 SF3B1O75533 1304 aaKnown RBP eCLIP8.42□□□□□ -1.065e-6■■■■■ 70.3
SNX13-201ENST00000409076 NFASCO94856 1347 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 SMIM28A0A1B0GU29 152 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 PMM2O15305 246 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ABCB1P08183 1280 aaPredicted RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 PRKCHP24723 683 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 GRK2P25098 689 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CPOXP36551 454 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 DPP6P42658 865 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CREB5Q02930 508 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 EFEMP1Q12805 493 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 TRAF2Q12933 501 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 LBX2Q6XYB7 198 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 FASTKD5Q7L8L6 764 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 CLEC4FQ8N1N0 589 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CBR4Q8N4T8 237 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 ZFP28Q8NHY6 868 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 CCDC138Q96M89 665 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 NSUN5Q96P11 429 aaKnown RBP8.42□□□□□ -1.06
SNX13-201ENST00000409076 QKIQ96PU8 341 aaKnown RBP eCLIP8.42□□□□□ -1.061e-6■■■■□ 26.7
SNX13-201ENST00000409076 RBBP8Q99708 897 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 APOL5Q9BWW9 433 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 FZD8Q9H461 694 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 PPCSQ9HAB8 311 aa8.42□□□□□ -1.06
SNX13-201ENST00000409076 RREB1Q92766 1687 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms