RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 RMDN1Q96DB5 314 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 NCKIPSDQ9NZQ3 722 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 CDH22Q9UJ99 828 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
PCNX4-204ENST00000406949 ZCWPW2A0A1B0GU75 182 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ATP6AP2A0A1C7CYW4 349 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SLC12A8A0AV02 714 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 GABRDO14764 452 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 FKBP6O75344 327 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ATP6AP2O75787 350 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 CCDC166P0CW27 439 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TFEBP19484 476 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TBX4P57082 545 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TAS2R39P59534 338 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 MED21Q13503 144 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 RAP1GAP2Q684P5 730 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 LRRC8EQ6NSJ5 796 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 CNTD1Q8N815 330 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ARL10Q8N8L6 244 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 KYQ8NBH2 561 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ATAD1Q8NBU5 361 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ANKRD27Q96NW4 1050 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TLE6Q9H808 572 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SARS2Q9NP81 518 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SORCS3Q9UPU3 1222 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SLC45A1Q9Y2W3 748 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TBX18O95935 607 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 HLA-DQB2P05538 268 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ASGR1P07306 291 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 PIK3R1P27986 724 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SLC1A2P43004 574 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ACTR3P61158 418 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 STX1BP61266 288 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 NSUN2Q08J23 767 aaKnown RBP eCLIP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TUSC3Q13454 348 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 HABP4Q5JVS0 413 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 BNC2Q6ZN30 1099 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 DDIASQ8IXT1 998 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 MAB21L3Q8N8X9 362 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 OR10T2Q8NGX3 314 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 B3GALT6Q96L58 329 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 GTF2IRD1Q9UHL9 959 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 DSEQ9UL01 958 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 RAP2CQ9Y3L5 183 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 LRRC42Q9Y546 428 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 CAPN14A8MX76 684 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 IRAK2O43187 625 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 CSPG5O95196 566 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 GPR15P49685 360 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 LSM12Q3MHD2 195 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 CTXN3Q4LDR2 81 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TIGD7Q6NT04 549 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 IRGCQ6NXR0 463 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 TMEM135Q86UB9 458 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 LRRTM3Q86VH5 581 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ZC3HC1Q86WB0 502 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 PCDH20Q8N6Y1 951 aaKnown RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ZSCAN18Q8TBC5 510 aaPredicted RBP12.04□□□□□ -0.48
PCNX4-204ENST00000406949 MAPK15Q8TD08 544 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 SORT1Q99523 831 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 ACBD6Q9BR61 282 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 NDFIP2Q9NV92 336 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 DNAJC28Q9NX36 388 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 CCDC167Q9P0B6 97 aa12.04□□□□□ -0.48
PCNX4-204ENST00000406949 E9PAM4 449 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 ZNF189O75820 626 aaPredicted RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 CHRNA1P02708 482 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 GFAPP14136 432 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 AOC1P19801 751 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 HSF5Q4G112 596 aaPredicted RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 CNSTQ6PJW8 725 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 BHMTQ93088 406 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 BCAP29Q9UHQ4 241 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 KNL1Q8NG31 2342 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 GIPC1O14908 333 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 ELNP15502 786 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 FLT3LGP49771 235 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 DSC2Q02487 901 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 UPP1Q16831 310 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 AGAP9Q5VTM2 703 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 C14orf80Q86SX3 495 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 DCP1BQ8IZD4 617 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 RSPH1Q8WYR4 309 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 SERPINB11Q96P15 392 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 MRPL46Q9H2W6 279 aaKnown RBP12.03□□□□□ -0.48
PCNX4-204ENST00000406949 ALG9Q9H6U8 611 aa12.03□□□□□ -0.48
PCNX4-204ENST00000406949 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms