RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ZBED6P86452 979 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 CDK17Q00537 523 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ECT2LQ008S8 904 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 OVGP1Q12889 678 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 NME3Q13232 169 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ISXQ2M1V0 245 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 PTPN20Q4JDL3 420 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 FAM102AQ5T9C2 384 aaPredicted RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 AGBL4Q5VU57 503 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 SPECC1LQ69YQ0 1117 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 TBC1D3GQ6DHY5 549 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 TBC1D3CQ6IPX1 549 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ACAD10Q6JQN1 1059 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 MSANTD2Q6P1R3 559 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ZNF571Q7Z3V5 609 aaPredicted RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 TMC6Q7Z403 805 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 TRIM69Q86WT6 500 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 GAS2L3Q86XJ1 694 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 XYLT1Q86Y38 959 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ZDHHC17Q8IUH5 632 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 MFN1Q8IWA4 741 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 TBC1D3Q8IZP1 549 aaPredicted RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 APCDD1Q8J025 514 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 SLC22A18ASQ8N1D0 253 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 DQX1Q8TE96 717 aaKnown RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 AZIN2Q96A70 460 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 FCRL2Q96LA5 508 aaPredicted RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 APOLD1Q96LR9 279 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 DEPDC7Q96QD5 511 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ANP32EQ9BTT0 268 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 TRIM5Q9C035 493 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 NUCKS1Q9H1E3 243 aaKnown RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 OSBPL2Q9H1P3 480 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 KDM4CQ9H3R0 1056 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 HAUS4Q9H6D7 363 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 FAM204AQ9H8W3 233 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 STARD5Q9NSY2 213 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 KLHL11Q9NVR0 708 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 ASNSD1Q9NWL6 643 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.35□□□□□ -1.39
RPA3-204ENST00000406109 ADAM22Q9P0K1 906 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 COX16Q9P0S2 106 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 STIM2Q9P246 746 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 SLC12A6Q9UHW9 1150 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 TPX2Q9ULW0 747 aaKnown RBP6.35□□□□□ -1.39
RPA3-204ENST00000406109 SATB2Q9UPW6 733 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 SCN8AQ9UQD0 1980 aa6.35□□□□□ -1.39
RPA3-204ENST00000406109 SETD2Q9BYW2 2564 aaPredicted RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 M0QYT0 321 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SMAPO00193 183 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 RNF103O00237 685 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 LCE2BO14633 110 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SCAMP1O15126 338 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 FFAR2O15552 330 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 HSF2BPO75031 334 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 PIAS2O75928 621 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 NEBLO76041 1014 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 TRUB2O95900 331 aaKnown RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 MOCS2O96007 188 aaPredicted RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 IL1BP01584 269 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 TPM1P09493 284 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 KRT3P12035 628 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 MMP8P22894 467 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 NOS2P35228 1153 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SLC11A2P49281 568 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 NUMBP49757 651 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 PDX1P52945 283 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 ST8SIA6P61647 398 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 PITX1P78337 314 aaPredicted RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 NFKB2Q00653 900 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 CNTN1Q12860 1018 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SFSWAPQ12872 951 aaKnown RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 CLN3Q13286 438 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 ELAVL3Q14576 367 aaKnown RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 POM121L1PQ3SYA9 428 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 TDRD12Q587J7 1177 aaKnown RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 SLC45A4Q5BKX6 768 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 ZC3H12AQ5D1E8 599 aaKnown RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 MS4A13Q5J8X5 152 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 OLFML1Q6UWY5 402 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 BEND5Q7L4P6 421 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 PRICKLE2Q7Z3G6 844 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 PRPF39Q86UA1 669 aaKnown RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 TAC4Q86UU9 113 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 PHF13Q86YI8 300 aaPredicted RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 VSTM4Q8IW00 320 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 UNC45BQ8IWX7 931 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 CFAP52Q8N1V2 620 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 CARNMT1Q8N4J0 409 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 HJURPQ8NCD3 748 aaPredicted RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 SYN2Q92777 582 aaPredicted RBP6.34□□□□□ -1.39
RPA3-204ENST00000406109 IQCDQ96DY2 449 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 ATXN7L3BQ96GX2 97 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SLC39A13Q96H72 371 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SERPINB11Q96P15 392 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SLC2A13Q96QE2 648 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 C11orf70Q9BRQ4 267 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 SELENOOQ9BVL4 669 aa6.34□□□□□ -1.39
RPA3-204ENST00000406109 TTYH3Q9C0H2 523 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms