RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 SHROOM3Q8TF72 1996 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 A0A0A6YYK5 440 aaPredicted RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 FAM47DPA6NHR8 397 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 GOLGA6L6A8MZA4 724 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 LATO43561 262 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 AP1G1O43747 822 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 GDF9O60383 454 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 RNGTTO60942 597 aaKnown RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 LEFTY1O75610 366 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 IGSF6O95976 241 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 IGHV4-34P06331 123 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 TCF4P15884 667 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 ENGP17813 658 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 AMPD1P23109 780 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 MAOBP27338 520 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 GRIA4P48058 902 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 RENBPP51606 427 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 SUOXP51687 545 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 ARSEP51690 589 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 NEK3P51956 506 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 RHOAP61586 193 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 NSUN2Q08J23 767 aaKnown RBP eCLIP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 MESDQ14696 234 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 ZNF805Q5CZA5 627 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 TXNRD3NBQ6F5E7 133 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 TCEAL6Q6IPX3 200 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 ARHGAP12Q8IWW6 846 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 RYBPQ8N488 228 aaPredicted RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 SNX19Q92543 992 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 TCEAL3Q969E4 200 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 CELF6Q96J87 481 aaKnown RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 ZNF670Q9BS34 389 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 TM6SF2Q9BZW4 377 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 MIR1-1HGQ9H1L0 117 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 PDFQ9HBH1 243 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 IPO11Q9UI26 975 aaKnown RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 PCDHA13Q9Y5I0 950 aa11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
AC007249.1-201ENST00000404616 ATXN2Q99700 1313 aaKnown RBP11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 C4orf47A7E2U8 309 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 UPK3BL1B0FP48 263 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 UPK3BL2E5RIL1 263 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 KRIT1O00522 736 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 CDX4O14627 284 aaPredicted RBP11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 TM4SF5O14894 197 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 DFNA5O60443 496 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 PALMO75781 387 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 NDUFA10O95299 355 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 IL4RP24394 825 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 HSPA9P38646 679 aaKnown RBP11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 MAPK8P45983 427 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 OVGP1Q12889 678 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 SLC14A1Q13336 389 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 CYTH1Q15438 398 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 SETMARQ53H47 684 aaPredicted RBP11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 SLC45A4Q5BKX6 768 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 PIP5KL1Q5T9C9 394 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 FBXL19Q6PCT2 694 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 TXLNBQ8N3L3 684 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ZCCHC9Q8N567 271 aaKnown RBP11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 NPWQ8N729 165 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 GRIN3AQ8TCU5 1115 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 NSMCE1Q8WV22 266 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ARRDC3Q96B67 414 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ZNF641Q96N77 438 aaPredicted RBP11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 TUBGCP5Q96RT8 1024 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ORAI3Q9BRQ5 295 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 CALN1Q9BXU9 219 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ZDHHC6Q9H6R6 413 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 SP110Q9HB58 689 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 DKK3Q9UBP4 350 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 SEPT3Q9UH03 358 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ACTL7AQ9Y615 435 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 LAMA1P25391 3075 aa11.87□□□□□ -0.51
AC007249.1-201ENST00000404616 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 J3KR12 359 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 DFFAO00273 331 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 VILLO15195 856 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 TSPAN6O43657 245 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 MAGEC1O60732 1142 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 CER1O95813 267 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 ZNF883P0CG24 379 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 ADRB3P13945 408 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 KDELR1P24390 212 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 NOP2P46087 812 aaKnown RBP11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 METAP1P53582 386 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 TAS2R38P59533 333 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 TAS2R40P59535 323 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 FOXK2Q01167 660 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 DPYSL3Q14195 570 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 PAFAH1B3Q15102 231 aaKnown RBP11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 ZFYVE27Q5T4F4 411 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 KIAA1161Q6NSJ0 714 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 GDPD4Q6W3E5 623 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
AC007249.1-201ENST00000404616 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms