RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NUF2Q9BZD4 464 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 WDR41Q9HAD4 459 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 STARD7Q9NQZ5 370 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 IARS2Q9NSE4 1012 aaKnown RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 TLK1Q9UKI8 766 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 SLC39A10Q9ULF5 831 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 SYNJ2BP-COX16A0A087WUM0 186 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 PIRO00625 290 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ZBTB24O43167 697 aaPredicted RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 MTSS1O43312 755 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 AMHP03971 560 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ASLP04424 464 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 SRGAP2BP0DMP2 458 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ERCC2P18074 760 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 CD68P34810 354 aaPredicted RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 AIF1P55008 147 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 CDC42EP1Q00587 391 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 MS4A2Q01362 244 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 GRM3Q14832 879 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 GLRA4Q5JXX5 417 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 RBM44Q6ZP01 1051 aaKnown RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 LIMS2Q7Z4I7 341 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 CNTD1Q8N815 330 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 BHLHE22Q8NFJ8 381 aaPredicted RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 STYXQ8WUJ0 223 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 WNT8BQ93098 351 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 MPP4Q96JB8 637 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 TSNARE1Q96NA8 513 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 SLC9A7Q96T83 725 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 BRD8Q9H0E9 1235 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 RBM38Q9H0Z9 239 aaKnown RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ADAMTS10Q9H324 1103 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 COPS7BQ9H9Q2 264 aaPredicted RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 EFCAB1Q9HAE3 211 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 PIGVQ9NUD9 493 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 COX16Q9P0S2 106 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 ZDHHC2Q9UIJ5 367 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 TMCO1Q9UM00 188 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 UBQLN1Q9UMX0 589 aaKnown RBP20.1■□□□□ 0.81
CCDC47-202ENST00000403162 PHF24Q9UPV7 400 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 HES2Q9Y543 173 aa20.1■□□□□ 0.81
CCDC47-202ENST00000403162 GPR32O75388 356 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 MYBPC1Q00872 1141 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 SEMA3BQ13214 749 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 LRRC23Q53EV4 343 aaPredicted RBP20.09■□□□□ 0.81
CCDC47-202ENST00000403162 B3GNT6Q6ZMB0 384 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 METTL25Q8N6Q8 603 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 RNF217Q8TC41 542 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 PPP1R36Q96LQ0 422 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 RHOJQ9H4E5 214 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 OCEL1Q9H607 264 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 TRHDEQ9UKU6 1024 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 OGDHLQ9ULD0 1010 aa20.09■□□□□ 0.81
CCDC47-202ENST00000403162 DDHD2O94830 711 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 ENO3P13929 434 aaPredicted RBP20.08■□□□□ 0.81
CCDC47-202ENST00000403162 DPP6P42658 865 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 CCR10P46092 362 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 PKNOX1P55347 436 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 NADK2Q4G0N4 442 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 ITPRIPL1Q6GPH6 555 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 ZC3HC1Q86WB0 502 aaKnown RBP20.08■□□□□ 0.81
CCDC47-202ENST00000403162 ALDH16A1Q8IZ83 802 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 PDCD6IPQ8WUM4 868 aaKnown RBP20.08■□□□□ 0.81
CCDC47-202ENST00000403162 NTAN1Q96AB6 310 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 TNIP3Q96KP6 325 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 ZNF560Q96MR9 790 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 CATSPER2Q96P56 530 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 HNRNPABQ99729 332 aaKnown RBP20.08■□□□□ 0.81
CCDC47-202ENST00000403162 EIF2AQ9BY44 585 aaKnown RBP20.08■□□□□ 0.81
CCDC47-202ENST00000403162 DUSP16Q9BY84 665 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 CDHR5Q9HBB8 845 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 CHRAC1Q9NRG0 131 aa20.08■□□□□ 0.81
CCDC47-202ENST00000403162 CNOT11Q9UKZ1 510 aaKnown RBP20.08■□□□□ 0.81
CCDC47-202ENST00000403162 TARM1B6A8C7 271 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 FAM72CH0Y354 149 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 ACOT8O14734 319 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 SPTLC1O15269 473 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 CD4P01730 458 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 COL6A2P12110 1019 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 ADRA1BP35368 520 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 HCAR3P49019 387 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 NAGLUP54802 743 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 SCAPQ12770 1279 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 NME3Q13232 169 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 ART3Q13508 389 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 APOFQ13790 326 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 INTS6LQ5JSJ4 861 aaKnown RBP20.08■□□□□ 0.8
CCDC47-202ENST00000403162 ZNF618Q5T7W0 954 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 FAM72AQ5TYM5 149 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 SYPL2Q5VXT5 272 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 FAM72DQ6L9T8 149 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 SERINC5Q86VE9 423 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 FAM72BQ86X60 149 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 LSMEM2Q8N112 164 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 APPL2Q8NEU8 664 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 FAM81AQ8TBF8 368 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 MOCOSQ96EN8 888 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 CNBD2Q96M20 576 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 OSMRQ99650 979 aa20.08■□□□□ 0.8
CCDC47-202ENST00000403162 PKP2Q99959 881 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms