RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 JAK1P23458 1154 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 SPIDRQ14159 915 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 PDZD8Q8NEN9 1154 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 FDXACB1Q9BRP7 624 aaPredicted RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF518BQ9C0D4 1074 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 MRPL46Q9H2W6 279 aaKnown RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 PAPPA2Q9BXP8 1791 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 HEATR9A2RTY3 570 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ZBBXA8MT70 800 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 B4GAT1O43505 415 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 INSRRP14616 1297 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 CNTFP26441 200 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ZNF132P52740 706 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 PRKCQQ04759 706 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 TBCELQ5QJ74 424 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 ZBTB8OSQ8IWT0 167 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 LRRC39Q96DD0 335 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 UPF3AQ9H1J1 476 aaKnown RBP17.29■□□□□ 0.36
PTPRA-205ENST00000399903 MOCS1Q9NZB8 636 aa17.29■□□□□ 0.36
PTPRA-205ENST00000399903 GMNNO75496 209 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 DPYSQ14117 519 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 THOC7Q6I9Y2 204 aaKnown RBP17.28■□□□□ 0.36
PTPRA-205ENST00000399903 ACVR1CQ8NER5 493 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 ACMSDQ8TDX5 336 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 PBXIP1Q96AQ6 731 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 TRIM8Q9BZR9 551 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 CCDC68Q9H2F9 335 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 GPC4O75487 556 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 NCAM1P13591 858 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 CYP2F1P24903 491 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 DNASE1L3Q13609 305 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 ATF7IP2Q5U623 682 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 RPS27LQ71UM5 84 aaKnown RBP17.28■□□□□ 0.36
PTPRA-205ENST00000399903 ARMCX2Q7L311 632 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 BTLAQ7Z6A9 289 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 COLGALT1Q8NBJ5 622 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 NPLQ9BXD5 320 aaPredicted RBP17.28■□□□□ 0.36
PTPRA-205ENST00000399903 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
PTPRA-205ENST00000399903 KRBA1A5PL33 1030 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 A6NL46 340 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 C2P06681 752 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 NFICP08651 508 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 HNRNPLP14866 589 aaKnown RBP eCLIP17.27■□□□□ 0.368e-8■■□□□ 13.5
PTPRA-205ENST00000399903 GP5P40197 560 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 CLCN2P51788 898 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 ZIK1Q3SY52 487 aaPredicted RBP17.27■□□□□ 0.36
PTPRA-205ENST00000399903 HMBOX1Q6NT76 420 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 TIFABQ6ZNK6 161 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 BRSK2Q8IWQ3 736 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 PARP8Q8N3A8 854 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 SLC10A4Q96EP9 437 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 TWNKQ96RR1 684 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 ADI1Q9BV57 179 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 SNRNP25Q9BV90 132 aaKnown RBP17.27■□□□□ 0.36
PTPRA-205ENST00000399903 TLK1Q9UKI8 766 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 PRORSD1PA6NEY8 169 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 C9IYK1 514 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 GPR25O00155 361 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 PAPSS1O43252 624 aaPredicted RBP17.27■□□□□ 0.36
PTPRA-205ENST00000399903 BMP10O95393 424 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 ESRRBO95718 433 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 DUOXA2Q1HG44 320 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 FSTL4Q6MZW2 842 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 ANKRD26P1Q6NSI1 321 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 NIPAL1Q6NVV3 410 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 DHRS4L2Q6PKH6 230 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 CDKL3Q8IVW4 592 aaPredicted RBP17.27■□□□□ 0.36
PTPRA-205ENST00000399903 SCAIQ8N9R8 606 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 HM13Q8TCT9 377 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPRA-205ENST00000399903 ACE2Q9BYF1 805 aaPredicted RBP17.27■□□□□ 0.36
PTPRA-205ENST00000399903 CYP4F12Q9HCS2 524 aa17.27■□□□□ 0.36
PTPRA-205ENST00000399903 ATP6AP2A0A1C7CYW4 349 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 ATP6AP2O75787 350 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 MICAL2O94851 1124 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 TUBA4AP68366 448 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 CCDC153Q494R4 210 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.35
PTPRA-205ENST00000399903 ADNPQ9H2P0 1102 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 ATAD3AQ9NVI7 634 aa17.27■□□□□ 0.35
PTPRA-205ENST00000399903 TCAF2A6NFQ2 919 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 MED7O43513 233 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 S100BP04271 92 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 CCNA2P20248 432 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 SLC7A2P52569 658 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 NKX2-5P52952 324 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 IER5Q5VY09 327 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 RNF135Q8IUD6 432 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 OR9I1Q8NGQ6 314 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
PTPRA-205ENST00000399903 CNPY3Q9BT09 278 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 SIAEQ9HAT2 523 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 OGTO15294 1046 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 GRM5P41594 1212 aa17.26■□□□□ 0.35
PTPRA-205ENST00000399903 RAD23AP54725 363 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms