RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 MRPL38Q96DV4 380 aaKnown RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 SLC6A18Q96N87 628 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZIM3Q96PE6 472 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 SIX2Q9NPC8 291 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 UBE2TQ9NPD8 197 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 IPO11Q9UI26 975 aaKnown RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 NAGPAQ9UK23 515 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZMYM2Q9UBW7 1377 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 EMSYQ7Z589 1322 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 CYP3A7-CYP3A51PA0A087WV96 503 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 LOC100653049A0A140TA62 436 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 SOWAHBA6NEL2 793 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 KRIT1O00522 736 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 HNRNPRO43390 633 aaKnown RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 BUB1BO60566 1050 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 KRT34O76011 436 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 F9P00740 461 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 HMGCRP04035 888 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 HOXC8P31273 242 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PPARGP37231 505 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 CASP3P42574 277 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 MYL6P60660 151 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 YPEL5P62699 121 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARF5P84085 180 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 CXCL9Q07325 125 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PPP3CAQ08209 521 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 FSTL1Q12841 308 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 EPHA7Q15375 998 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 TRIP13Q15645 432 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 GPR162Q16538 588 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 AAGABQ6PD74 315 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 LRRC31Q6UY01 552 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 C16orf59Q7L2K0 433 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARMCX2Q7L311 632 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 MIER3Q7Z3K6 550 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PEX26Q7Z412 305 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PRUNE1Q86TP1 453 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 OSTM1Q86WC4 334 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 CDR2LQ86X02 465 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PSTKQ8IV42 348 aaKnown RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZC3H7AQ8IWR0 971 aaKnown RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PLEKHO2Q8TD55 490 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 C11orf24Q96F05 449 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 MAML3Q96JK9 1138 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 RUFY1Q96T51 708 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 TRIM2Q9C040 744 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 QRSL1Q9H0R6 528 aaKnown RBP6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZDHHC7Q9NXF8 308 aa6.34□□□□□ -1.39
TRAPPC13-202ENST00000399438 PLIN4Q96Q06 1357 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF541Q9H0D2 1346 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 A0A1W2PQJ5 194 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 TCRBV7S2A1N4TA0A589 114 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 LRRD1A4D1F6 860 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 OR6C74A6NCV1 312 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 A8MV72 311 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PODXLO00592 558 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 WNT10BO00744 389 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 HNRNPDLO14979 420 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 HTRA2O43464 458 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 FGGP02679 453 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 KCNJ1P48048 391 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GNGT1P63211 74 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 TNFAIP1Q13829 316 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 C3orf36Q3SXR2 165 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 DEPDC1Q5TB30 811 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NEK5Q6P3R8 708 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GRAMD2AQ8IUY3 354 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NPLOC4Q8TAT6 608 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 UBLCP1Q8WVY7 318 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 WRNIP1Q96S55 665 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 HSD17B14Q9BPX1 270 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SIKE1Q9BRV8 207 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 IDI2Q9BXS1 227 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ACE2Q9BYF1 805 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 R3HDMLQ9H3Y0 253 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 TMEM206Q9H813 350 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SARS2Q9NP81 518 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SDHAF3Q9NRP4 125 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 AGPAT3Q9NRZ7 376 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 EHD3Q9NZN3 535 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GPC6Q9Y625 555 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 KIAA1217Q5T5P2 1943 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NDUFS8O00217 210 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 TO15178 435 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PTBP3O95758 552 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NDST3O95803 873 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ALDH4A1P30038 563 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CSTF2P33240 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLCO1A2P46721 670 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 HSD17B4P51659 736 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ARHGDIBP52566 201 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 B2MP61769 119 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 RPS6P62753 249 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 LMAN2Q12907 356 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms