RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 REEP1Q9H902 201 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 SPG21Q9NZD8 308 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 BTBD7Q9P203 1132 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 SLC17A7Q9P2U7 560 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 STK39Q9UEW8 545 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 TPRKBQ9Y3C4 175 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 LYVE1Q9Y5Y7 322 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 A0A087X1B8 175 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 FOXO6A8MYZ6 492 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 LGR5O75473 907 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 EPN2O95208 641 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 MED26O95402 600 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 IRGCQ6NXR0 463 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 KLHL5Q96PQ7 755 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 EBNA1BP2Q99848 306 aaKnown RBP13.3□□□□□ -0.28
ITSN1-208ENST00000399349 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-208ENST00000399349 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
ITSN1-208ENST00000399349 VAV1P15498 845 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 ATP5F1P24539 256 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-208ENST00000399349 PSME3P61289 254 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 SEMA5AQ13591 1074 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 TRIQKQ629K1 86 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 PCDHB18PQ96TA0 734 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 RNF208Q9H0X6 261 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 GOLGA2P5Q9HBQ8 144 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 CLIC5Q9NZA1 410 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 SLC12A4Q9UP95 1085 aa13.3□□□□□ -0.28
ITSN1-208ENST00000399349 TBC1D3BA6NDS4 549 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 NT5C1B-RDH14C9J2C7 533 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ZNF37AP17032 561 aaPredicted RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 CTPS1P17812 591 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PSMA3P25788 255 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 CPSF6Q16630 551 aaKnown RBP eCLIP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ARHGAP36Q6ZRI8 547 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 GPR156Q8NFN8 814 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PROX1Q92786 737 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 RCN3Q96D15 328 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 MMADHCQ9H3L0 296 aaPredicted RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 EGFL7Q9UHF1 273 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 COG5Q9UP83 839 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 CYP3A7-CYP3A51PA0A087WV96 503 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 CATP04040 527 aaKnown RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ITGAVP06756 1048 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ANXA5P08758 320 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 HDCP19113 662 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ATP6V1C1P21283 382 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 CYP3A7P24462 503 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 CCL23P55773 120 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 GALNT3Q14435 633 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PPP1R14AQ96A00 147 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 MYLPFQ96A32 169 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ARMC7Q9H6L4 198 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ACSS3Q9H6R3 686 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ARHGAP28Q9P2N2 729 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 R3HDM2Q9Y2K5 976 aaKnown RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 A0A087WXM4 84 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 FSCN2O14926 492 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 MYL12BO14950 172 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ANXA6P08133 673 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 SNRPB2P08579 225 aaKnown RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 SMIM10L2AP0DMW4 78 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 SMIM10L2BP0DMW5 78 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 DGKAP23743 735 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PTPN3P26045 913 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 HOXA10P31260 410 aaPredicted RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 RPL38P63173 70 aaKnown RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 MAPKAPK3Q16644 382 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 INSCQ1MX18 579 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ZCCHC8Q6NZY4 707 aaKnown RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 RIOX2Q8IUF8 465 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 C10orf107Q8IVU9 208 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 SETD9Q8NE22 299 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 OR6K2Q8NGY2 324 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 HELQQ8TDG4 1101 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 SPACA7Q96KW9 195 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 C12orf65Q9H3J6 166 aaKnown RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 VPS51Q9UID3 782 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 RABGEF1Q9UJ41 708 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 NCANO14594 1321 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 NRCAMQ92823 1304 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 SRRM3A6NNA2 597 aaPredicted RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 C21orf59P57076 290 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PPM1LQ5SGD2 360 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 ARMC3Q5W041 872 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
ITSN1-208ENST00000399349 PNPOQ9NVS9 261 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 FBXO5Q9UKT4 447 aa13.29□□□□□ -0.28
ITSN1-208ENST00000399349 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 MYL12AP19105 171 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 EIF2B2P49770 351 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 KRR1Q13601 381 aaKnown RBP13.28□□□□□ -0.28
ITSN1-208ENST00000399349 SPANXN2Q5MJ10 180 aa13.28□□□□□ -0.28
ITSN1-208ENST00000399349 FAM43BQ6ZT52 329 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms